RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 FGFR4P22455 802 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ST8SIA6P61647 398 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 GLE1Q53GS7 698 aaKnown RBP12.86□□□□□ -0.35
SPG11-201ENST00000261866 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 CRLF3Q8IUI8 442 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 CEP19Q96LK0 163 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 DIAPH2O60879 1101 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ENDOD1O94919 500 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 NCOA4Q13772 614 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 MTF1Q14872 753 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 MAP1SQ66K74 1059 aaPredicted RBP12.86□□□□□ -0.35
SPG11-201ENST00000261866 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 MAP3K7O43318 606 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ESRRAP11474 423 aaPredicted RBP12.86□□□□□ -0.35
SPG11-201ENST00000261866 EPHX2P34913 555 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 C11orf96Q7Z7L8 435 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ZBTB18Q99592 522 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ZNF185O15231 689 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 TFDP2Q14188 446 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 SYTL3Q4VX76 610 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 PARVAQ9NVD7 372 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ARSEP51690 589 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 NUDCD3Q8IVD9 361 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 MED4Q9NPJ6 270 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ENTPD7Q9NQZ7 604 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 NR1D1P20393 614 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 CHRNA3P32297 505 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
SPG11-201ENST00000261866 AGPAT1Q99943 283 aa12.86□□□□□ -0.35
SPG11-201ENST00000261866 PNPLA7Q6ZV29 1317 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 FAM47DPA6NHR8 397 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 GOLGA7BQ2TAP0 167 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ANKRD20A4Q4UJ75 823 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ZC3H12BQ5HYM0 836 aaKnown RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ATG16L1Q676U5 607 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 Q9H521 79 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 STXBP3O00186 592 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 WEE1P30291 646 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 BTN2A2Q8WVV5 523 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 SCP2P22307 547 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TWF1Q12792 350 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 SNCBQ16143 134 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TTC23LQ6PF05 361 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 DCUN1D1Q96GG9 259 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 TMEM117Q9H0C3 514 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 F8W8V4 182 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 PTK2BQ14289 1009 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 NCAPHQ15003 741 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 NEUROG2Q9H2A3 272 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 KCNV1Q6PIU1 500 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 UNC45AQ9H3U1 944 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 KCNH7Q9NS40 1196 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 AIPL1Q9NZN9 384 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 KRT37O76014 449 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 CLCN6P51797 869 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 EFNA5P52803 228 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 C10orf120Q5SQS8 335 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 STYK1Q6J9G0 422 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
SPG11-201ENST00000261866 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
SPG11-201ENST00000261866 GTPBP10A4D1E9 387 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 PPP3CCP48454 512 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 RPS6P62753 249 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 ALX1Q15699 326 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CCDC144BQ3MJ40 725 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms