RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 LYNP07948 512 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 PLCG2P16885 1265 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 DRD4P21917 467 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 CHN2P52757 468 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TFCP2Q12800 502 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TRMT5Q32P41 509 aaKnown RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 C10orf76Q5T2E6 689 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 SDE2Q6IQ49 451 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 C4orf33Q8N1A6 199 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 SLC25A41Q8N5S1 370 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 CRCPO75575 148 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 UNC5CO95185 931 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 S100A9P06702 114 aaKnown RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 FLT3P36888 993 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TOB2Q14106 344 aaPredicted RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 RASA3Q14644 834 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 ZBTB46Q86UZ6 589 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 CCT6BQ92526 530 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
KPNA3-201ENST00000261667 FADS3Q9Y5Q0 445 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 SNX3O60493 162 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 P4HA1P13674 534 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 SLC1A4P43007 532 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 PTGDRQ13258 359 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 TBC1D10AQ9BXI6 508 aa11.25□□□□□ -0.61
KPNA3-201ENST00000261667 CCDC195A0A1B0GUA6 201 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 A0A1B0GVG6 124 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 PDLIM1O00151 329 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 PEX14O75381 377 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 AFPP02771 609 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 ERVK-24P63145 666 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 LIN9Q5TKA1 542 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 ATPIF1Q9UII2 106 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 IQANK1A0A1B0GTG1 560 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 NBNO60934 754 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 CCT3P49368 545 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 OVGP1Q12889 678 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 BFSP1Q12934 665 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 CCDC85BQ15834 202 aaPredicted RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 HDDC2Q7Z4H3 204 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 KBTBD2Q8IY47 623 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 CYGBQ8WWM9 190 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 CELF4Q9BZC1 486 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 PABPC3Q9H361 631 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 SMG5Q9UPR3 1016 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 KLHL20Q9Y2M5 609 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 RTL9Q8NET4 1388 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 ERBB3P21860 1342 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 H0YC42 278 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 RNMTO43148 476 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 HOXD12P35452 270 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 TXKP42681 527 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 TRAF2Q12933 501 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 TMTC4Q5T4D3 741 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 ANO7Q6IWH7 933 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 KBTBD3Q8NAB2 608 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
KPNA3-201ENST00000261667 GDPD5Q8WTR4 605 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
KPNA3-201ENST00000261667 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 WDR47O94967 919 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CCNE1P24864 410 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 IL12RB1P42701 662 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PDE4BQ07343 736 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 SMU1Q2TAY7 513 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 HDAC2Q92769 488 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 BORCS5Q969J3 196 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 B3GALT6Q96L58 329 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 HAUS7Q99871 368 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 MYLK2Q9H1R3 596 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 GSNP06396 782 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CALM1P0DP23 149 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CALM2P0DP24 149 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CALM3P0DP25 149 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ACTN1P12814 892 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CDK7P50613 346 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ZNF268Q14587 947 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PDK3Q15120 406 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ATG14Q6ZNE5 492 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms