RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 OLIG1Q8TAK6 271 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DDX27Q96GQ7 796 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 SNF8Q96H20 258 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ANGPTL2Q9UKU9 493 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 STX8Q9UNK0 236 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF232Q9UNY5 417 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF510Q9Y2H8 683 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MYH14Q7Z406 1995 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF335Q9H4Z2 1342 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 GSTTP1A0A1W2PQM5 241 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 A6NJR5 290 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TOM1O60784 492 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 AKAP3O75969 853 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TMCC1O94876 653 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 HAUS5O94927 633 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ASLP04424 464 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PLA2G4BP0C869 781 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DLATP10515 647 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MUTP22033 750 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CASP5P51878 434 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DSG1Q02413 1049 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 STAT4Q14765 748 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 LLGL1Q15334 1064 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 RGS9BPQ6ZS82 235 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 RFX8Q6ZV50 586 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 OTOAQ7RTW8 1153 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 SPATA24Q86W54 205 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 NME8Q8N427 588 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 NAT14Q8WUY8 206 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 LZICQ8WZA0 190 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PWWP2AQ96N64 755 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TUBB6Q9BUF5 446 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DNAJC18Q9H819 358 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MKNK2Q9HBH9 465 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TYW1Q9NV66 732 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ARL8BQ9NVJ2 186 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MCM9Q9NXL9 1143 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DCTN4Q9UJW0 460 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ANAPC5Q9UJX4 755 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CHMP2BQ9UQN3 213 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 EP400Q96L91 3159 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CACNA1SQ13698 1873 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CALUO43852 315 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 OPHN1O60890 802 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 STARD3NLO95772 234 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TROVE2P10155 538 aaKnown RBP eCLIP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MAGEA10P43363 369 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CHRNDQ07001 517 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PPP2R5CQ13362 524 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TRIP13Q15645 432 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 KNOP1Q1ED39 458 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PRUNE1Q86TP1 453 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 PALB2Q86YC2 1186 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 RIBC1Q8N443 379 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF384Q8TF68 577 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 C1orf54Q8WWF1 131 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 GJA10Q969M2 543 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 SLC35C1Q96A29 364 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 LENG1Q96BZ8 264 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 NSL1Q96IY1 281 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 STK33Q9BYT3 514 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 WNT8AQ9H1J5 351 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DNAJC12Q9UKB3 198 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 GRID1Q9ULK0 1009 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 NIP7Q9Y221 180 aaKnown RBP eCLIP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TRAF3IP3Q9Y228 551 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TSPY3P0CV98 308 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 TSPY8P0CW00 308 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC166P0CW27 439 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CA4P22748 312 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CETN2P41208 172 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CASP4P49662 377 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SIX1Q15475 284 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 ANKRD23Q86SG2 305 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 MARCH10Q8NA82 808 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 DENND1AQ8TEH3 1009 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 MAML1Q92585 1016 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 C9orf72Q96LT7 481 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 FNBP1Q96RU3 617 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SMC6Q96SB8 1091 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 ECSITQ9BQ95 431 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 TRABDQ9H4I3 376 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 CIDEBQ9UHD4 219 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 NUMBLQ9Y6R0 609 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 COL1A1P02452 1464 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 TAF1P21675 1872 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 GTPBP10A4D1E9 387 aaKnown RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 A8MXQ7 604 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 PRPF4O43172 522 aaKnown RBP eCLIP7.68□□□□□ -1.185e-7■■■■□ 22.3
CSDE1-201ENST00000261443 SPOPO43791 374 aa7.68□□□□□ -1.18
CSDE1-201ENST00000261443 FTLP02792 175 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-201ENST00000261443 ITGA2BP08514 1039 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms