RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 LACTBL1A8MY62 500 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 EOMESO95936 686 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 ACTN1P12814 892 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 KRT13P13646 458 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 CDK11BP21127 795 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 MCCD1P59942 119 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 KRT31Q15323 416 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 C1orf220Q5T0J3 134 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 ALKAL1Q6UXT8 129 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 PGBD4Q96DM1 585 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 RNF19AQ9NV58 838 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 LRRIQ3A6PVS8 624 aaPredicted RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 MLH1P40692 756 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 RGS19P49795 217 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 AFF1P51825 1210 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 WDR5P61964 334 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 SPAG1Q07617 926 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 XKR4Q5GH76 650 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 DCAF17Q5H9S7 520 aaPredicted RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 PSRC1Q6PGN9 363 aaPredicted RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 APTXQ7Z2E3 356 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 TMC2Q8TDI7 906 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 SLC35C1Q96A29 364 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 TUBGCP2Q9BSJ2 902 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 ASB7Q9H672 318 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 RSAD1Q9HA92 442 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 TAB2Q9NYJ8 693 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 CNTN3Q9P232 1028 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 LIMA1Q9UHB6 759 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 GIT1Q9Y2X7 761 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
CCDC90B-201ENST00000260054 CITO14578 2027 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 EFCAB14O75071 495 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 IL18RAPO95256 599 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 FGFR1P11362 822 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 DEFB103AP81534 67 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 LMBRD2Q68DH5 695 aaPredicted RBP17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 GSTCDQ8NEC7 633 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 GAD1Q99259 594 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 ANK1P16157 1881 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 CEP290O15078 2479 aa17.14■□□□□ 0.33
CCDC90B-201ENST00000260054 ARL5CA6NH57 179 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 LRRC10BA6NIK2 292 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CAPN15O75808 1086 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 NFICP08651 508 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CLDN10P78369 228 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 ENPEPQ07075 957 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 MIIPQ5JXC2 388 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CLLU1OSQ5K130 101 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 JADE1Q6IE81 842 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CD302Q8IX05 232 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CGRRF1Q99675 332 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 CXXC1Q9P0U4 656 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 RALGAPA2Q2PPJ7 1873 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 SMIM28A0A1B0GU29 152 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 FSD2A1L4K1 749 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 PTGESO14684 152 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 OFD1O75665 1012 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 AMHP03971 560 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 SURF1Q15526 300 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 OR5B17Q8NGF7 314 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 HELQQ8TDG4 1101 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 ZNF516Q92618 1163 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 TOP1MTQ969P6 601 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
CCDC90B-201ENST00000260054 TNRC18O15417 2968 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 AP5Z1O43299 807 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms