RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 INHBAP08476 426 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ZBTB48P10074 688 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 EPB42P16452 691 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CD58P19256 250 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CASP2P42575 452 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PHKA1P46020 1223 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 VAMP7P51809 220 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PEX3P56589 373 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 GRSF1Q12849 480 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNF38-201ENST00000259605 CAMK2GQ13555 558 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 DARS2Q6PI48 645 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 U2AF1L4Q8WU68 220 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 RAPGEF5Q92565 580 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 LARP4BQ92615 738 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 PABPC5Q96DU9 382 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAR2Q96K12 515 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 MXD3Q9BW11 206 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CALN1Q9BXU9 219 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CASS4Q9NQ75 786 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SEC31BQ9NQW1 1179 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SOHLH2Q9NX45 425 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ATP6V1HQ9UI12 483 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 DNAJC12Q9UKB3 198 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PRDM4Q9UKN5 801 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ZMYND8Q9ULU4 1186 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 PCDHA6Q9UN73 950 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CTNND2Q9UQB3 1225 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 HBS1LQ9Y450 684 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 PCDHA8Q9Y5H6 950 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 USP31Q70CQ4 1352 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NPC1L1Q9UHC9 1359 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SYNMO15061 1565 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 KIAA0556O60303 1618 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TRAV19A0A0A6YYK7 116 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 LRRC72A6NJI9 287 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CHD1O14646 1710 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 MEIS2O14770 477 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ADH1CP00326 375 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CFIP05156 583 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NR3C2P08235 984 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 H2AFZP0C0S5 128 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CPS1P31327 1500 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 RAP1GDS1P52306 607 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TERF1P54274 439 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CACNB3P54284 484 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 MYL5Q02045 173 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ACTN3Q08043 901 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 TOMM20Q15388 145 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PTGISQ16647 500 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PUS10Q3MIT2 529 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 WDR45BQ5MNZ6 344 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SPOPLQ6IQ16 392 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 H2AFVQ71UI9 128 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TAS1R3Q7RTX0 852 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAM98AQ8NCA5 519 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 VPS37AQ8NEZ2 397 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CEP70Q8NHQ1 597 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 HCAR2Q8TDS4 363 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FBXO32Q969P5 355 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 VMP1Q96GC9 406 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PRRX2Q99811 253 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SRRTQ9BXP5 876 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 GPR88Q9GZN0 384 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 HIPK3Q9H422 1215 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 MINPP1Q9UNW1 487 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PEG3Q9GZU2 1588 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ATP7BP35670 1465 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CHL1O00533 1208 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 AVILO75366 819 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 KRT33AO76009 404 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FGAP02671 866 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SLFN14P0C7P3 912 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CYP2A6P11509 494 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 ALOX15P16050 662 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 RBMS1P29558 406 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 AXLP30530 894 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NOS2P35228 1153 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 MTHFRP42898 656 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NPEPPSP55786 919 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 YWHAGP61981 247 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNF38-201ENST00000259605 AP2B1P63010 937 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 BAATQ14032 418 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 STAT4Q14765 748 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FSCN1Q16658 493 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 MTSS1LQ765P7 747 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NLRP9Q7RTR0 991 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 METTL3Q86U44 580 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 NOSTRINQ8IVI9 506 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 KLHL7Q8IXQ5 586 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 AVL9Q8NBF6 648 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PHC3Q8NDX5 983 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TRIM58Q8NG06 486 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNF38-201ENST00000259605 NEDD1Q8NHV4 660 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms