RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 KIF5AQ12840 1032 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 NFIL3Q16649 462 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 ZNF484Q5JVG2 852 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 HS2ST1Q7LGA3 356 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 TRIM58Q8NG06 486 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 TRAPPC12Q8WVT3 735 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 KCNN1Q92952 543 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 IQCDQ96DY2 449 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 CCDC114Q96M63 670 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 ACCSQ96QU6 501 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 ARHGAP28Q9P2N2 729 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 TBX20Q9UMR3 447 aa13.42□□□□□ -0.26
DDB2-201ENST00000256996 ADGRA3Q8IWK6 1321 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 DENND3A2RUS2 1198 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 H0YCG3 227 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 FAM107AO95990 144 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 NR3C1P04150 777 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 PLEKP08567 350 aaPredicted RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 NAMPTP43490 491 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 CPT1AP50416 773 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 MARSP56192 900 aaKnown RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 RNF187Q5TA31 235 aaPredicted RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 IER5Q5VY09 327 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 MAP4K3Q8IVH8 894 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 ASAP3Q8TDY4 903 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 TMEM174Q8WUU8 243 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 PRPF31Q8WWY3 499 aaKnown RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 HVCN1Q96D96 273 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 LRRC1Q9BTT6 524 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 SLC40A1Q9NP59 571 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 SAGE1Q9NXZ1 904 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 DMGDHQ9UI17 866 aaKnown RBP13.41□□□□□ -0.26
DDB2-201ENST00000256996 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
DDB2-201ENST00000256996 DUSP11O75319 330 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 F2P00734 622 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 GNRH1P01148 92 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 GBP2P32456 591 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 ABCD1P33897 745 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 MTIF2P46199 727 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 CACNB2Q08289 660 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 GRIK3Q13003 919 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 NAA35Q5VZE5 725 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 CCDC13Q8IYE1 715 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 SPATA4Q8NEY3 305 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 ZNF473Q8WTR7 871 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 FAM210AQ96ND0 272 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 NOC4LQ9BVI4 516 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 RNF14Q9UBS8 474 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 SIK3Q9Y2K2 1263 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 PCDHA13Q9Y5I0 950 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 CLIC2O15247 247 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 TACC1O75410 805 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 AKAP3O75969 853 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 C22orf31O95567 290 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 GHRP10912 638 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 ELNP15502 786 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 LSP1P33241 339 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 RWDD2BP57060 319 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 SNRPFP62306 86 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 LMNB2Q03252 620 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 TRIM32Q13049 653 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 MXD4Q14582 209 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 RBBP5Q15291 538 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 SND1Q7KZF4 910 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDB2-201ENST00000256996 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 PSPC1Q8WXF1 523 aaKnown RBP13.4□□□□□ -0.26
DDB2-201ENST00000256996 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 CD248Q9HCU0 757 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 DMAC2Q9NW81 257 aa13.4□□□□□ -0.26
DDB2-201ENST00000256996 COL1A2P08123 1366 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 ZSWIM8A7E2V4 1837 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 ANKRD33BA6NCL7 494 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 MAGEB2O15479 319 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 SEPT4O43236 478 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 KLRC1P26715 233 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 IGBP1P78318 339 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 ADCY2Q08462 1091 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 CAPSQ13938 189 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 SPA17Q15506 151 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
DDB2-201ENST00000256996 EFCAB12Q6NXP0 572 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
DDB2-201ENST00000256996 ZNF296Q8WUU4 475 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms