RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 STKLD1Q8NE28 680 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 FBXL13Q8NEE6 735 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 TRPV1Q8NER1 839 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 TMEM40Q8WWA1 233 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 CTNNBL1Q8WYA6 563 aaPredicted RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 SNX9Q9Y5X1 595 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 FOCADQ5VW36 1801 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 LRRC10BA6NIK2 292 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 C2CD2LO14523 706 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 NOL4O94818 638 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 NFICP08651 508 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 AKR1A1P14550 325 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 PSEN2P49810 448 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 NCOA4Q13772 614 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 KCNV1Q6PIU1 500 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 KLHL11Q9NVR0 708 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 STBD1O95210 358 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 NAMPTP43490 491 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 GTF2BQ00403 316 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 HIC1Q14526 733 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 SCLYQ96I15 445 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 CHD7Q9P2D1 2997 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 TBX2Q13207 712 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 IQSEC1Q6DN90 963 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 DAAM2Q86T65 1068 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 REXO1L1PQ8IX06 675 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 TCP11Q8WWU5 503 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 APBA2Q99767 749 aa12.54□□□□□ -0.4
LIN28A-201ENST00000254231 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
LIN28A-201ENST00000254231 KIAA1217Q5T5P2 1943 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 NFASCO94856 1347 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF263O14978 683 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ZEB2O60315 1214 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CAPN15O75808 1086 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 MMEP08473 750 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 RGS7P49802 495 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 C11orf70Q9BRQ4 267 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CAPN6Q9Y6Q1 641 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 MAP3K6O95382 1288 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CFHP08603 1231 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ICAM3P32942 547 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF131P52739 623 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CYP24A1Q07973 514 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 TMEM139Q8IV31 216 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 PPTC7Q8NI37 304 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 UBXN4Q92575 508 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 BRWD1Q9NSI6 2320 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 CTAGE9A4FU28 777 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 LACTBL1A8MY62 500 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
LIN28A-201ENST00000254231 GPC3P51654 580 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 APLP1P51693 650 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 KRT83P78385 493 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 KLHL7Q8IXQ5 586 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 OR6B3Q8NGW1 331 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 PANX2Q96RD6 677 aa12.53□□□□□ -0.4
LIN28A-201ENST00000254231 ATAD5Q96QE3 1844 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 TOM1L1O75674 476 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 C22orf31O95567 290 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 TNNC2P02585 160 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.4
LIN28A-201ENST00000254231 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.4
LIN28A-201ENST00000254231 CD52P31358 61 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 VPS41P49754 854 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms