RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PPP2R5EQ16537 467 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 C1orf186Q6ZWK4 172 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 HAUS6Q7Z4H7 955 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 PGM2Q96G03 612 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 TEKT3Q9BXF9 490 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 ROBO3Q96MS0 1386 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 A0A0A6YYK5 440 aaPredicted RBP12.76□□□□□ -0.37
USHBP1-201ENST00000252597 RGL2O15211 777 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 RTN2O75298 545 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 FOSP01100 380 aaPredicted RBP12.76□□□□□ -0.37
USHBP1-201ENST00000252597 SNHG28P0DPA3 235 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 ADRA2BP18089 450 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 STAT2P52630 851 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 JAG1P78504 1218 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 P3H1Q32P28 736 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 FAM213AQ9BRX8 229 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
USHBP1-201ENST00000252597 NPHS2Q9NP85 383 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 C15orf41Q9Y2V0 281 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 SUGT1Q9Y2Z0 365 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 ZNF831Q5JPB2 1677 aa12.76□□□□□ -0.37
USHBP1-201ENST00000252597 CES2O00748 559 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 MGRN1O60291 552 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 DNAJC8O75937 253 aaPredicted RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CYP3A4P08684 503 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ATP2A2P16615 1042 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CPA2P48052 419 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CAPRIN2Q6IMN6 1127 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 APOBEC3HQ6NTF7 200 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 COL23A1Q86Y22 540 aaPredicted RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 LRRC8CQ8TDW0 803 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CCDC17Q96LX7 622 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 NT5C1BQ96P26 610 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 RBM15Q96T37 977 aaKnown RBP eCLIP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 VAV3Q9UKW4 847 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 PLS3P13797 630 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CHRNB2P17787 502 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CEP55Q53EZ4 464 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CYFIP1Q7L576 1253 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ZBED8Q8IZ13 594 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 EPS8L1Q8TE68 723 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ZBTB10Q96DT7 871 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 SAE1Q9UBE0 346 aaPredicted RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 TNRC6CQ9HCJ0 1690 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ASAP2O43150 1006 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 SREBF1P36956 1147 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 NSFP46459 744 aaKnown RBP12.75□□□□□ -0.37
USHBP1-201ENST00000252597 MFAP3P55082 362 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 IL9RQ01113 521 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 DGKZQ13574 1117 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 HYIQ5T013 277 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 LRRC37BQ96QE4 947 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
USHBP1-201ENST00000252597 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 BTNL10A8MVZ5 291 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 BBOX1O75936 387 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 NUDT17P0C025 328 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 CETPP11597 493 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 IL1R1P14778 569 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 CYP11B1P15538 503 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 MUM1Q2TAK8 710 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 DPY19L2P1Q6NXN4 242 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
USHBP1-201ENST00000252597 OSBPL1AQ9BXW6 950 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
USHBP1-201ENST00000252597 SGK1O00141 431 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 ENTPD5O75356 428 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 EPHB2P29323 1055 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 ATP5DP30049 168 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 CCNHP51946 323 aaPredicted RBP12.74□□□□□ -0.37
USHBP1-201ENST00000252597 GPS1Q13098 491 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 FMNL3Q8IVF7 1028 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 KIFAP3Q92845 792 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 SNF8Q96H20 258 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 KREMEN1Q96MU8 473 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 HERPUD2Q9BSE4 406 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 TCHPQ9BT92 498 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 WNT8AQ9H1J5 351 aa12.74□□□□□ -0.37
USHBP1-201ENST00000252597 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms