RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LILRB3O75022 631 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 EFEMP2O95967 443 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 MCF2P10911 925 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 PROZP22891 400 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 SP100P23497 879 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 CLCN4P51793 760 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 NCKAP1LP55160 1127 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 DSG1Q02413 1049 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 NOLC1Q14978 699 aaKnown RBP eCLIP23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 STK38Q15208 465 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 NAB2Q15742 525 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 SPRYD3Q8NCJ5 442 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 DAXXQ9UER7 740 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 ABLIM1O14639 778 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 TEX28O15482 410 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 TOM1L1O75674 476 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 ADH1AP07327 375 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 WEE2P0C1S8 567 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 SLC39A14Q15043 492 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 USP41Q3LFD5 358 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 KIAA0319Q5VV43 1072 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 KANK3Q6NY19 840 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 HAUS6Q7Z4H7 955 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 KRI1Q8N9T8 703 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 RIN2Q8WYP3 895 aaPredicted RBP23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 FBXL18Q96ME1 805 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 ACAP3Q96P50 834 aa23.15■■□□□ 1.3
HCFC1R1-201ENST00000248089 MTCL1Q9Y4B5 1905 aaKnown RBP23.14■■□□□ 1.3
HCFC1R1-201ENST00000248089 FAM86C2PA6NEL3 165 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 PI4K2BG5E9Z4 385 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 ITIH3Q06033 890 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 SEZ6Q53EL9 994 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 RRAGBQ5VZM2 374 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 RNF135Q8IUD6 432 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 GLYCTKQ8IVS8 523 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 PPP1R10Q96QC0 940 aaKnown RBP23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 ADAM7Q9H2U9 754 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 GOLGA2P5Q9HBQ8 144 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 TSHZ2Q9NRE2 1034 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 CHST7Q9NS84 486 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 STK17AQ9UEE5 414 aa23.14■■□□□ 1.29
HCFC1R1-201ENST00000248089 DENND4AQ7Z401 1863 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 TRIOO75962 3097 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 DCXO43602 365 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 BRD1O95696 1058 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 MYBP10242 640 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 ALADP13716 330 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 DDIT3P35638 169 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZNF131P52739 623 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 FOXD4L6Q3SYB3 417 aaPredicted RBP23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 TMC5Q6UXY8 1006 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 FOXD4L3Q6VB84 417 aaPredicted RBP23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZPBP2Q6X784 338 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 DYMQ7RTS9 669 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 CEP57Q86XR8 500 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 SNX27Q96L92 541 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZNF396Q96N95 335 aaPredicted RBP23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 SFXN1Q9H9B4 322 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 MAN1C1Q9NR34 630 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 MUTYHQ9UIF7 546 aa23.13■■□□□ 1.29
HCFC1R1-201ENST00000248089 SMIM28A0A1B0GU29 152 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 LOC730098B7Z3J9 87 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 HNRNPDLO14979 420 aaKnown RBP23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 CLDN3O15551 220 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 TRAK2O60296 914 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 GLUD1P00367 558 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 RPL17P18621 184 aaKnown RBP23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 NASPP49321 788 aaPredicted RBP23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 LIG4P49917 911 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 CLCNKBP51801 687 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 RTP2Q5QGT7 225 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 FAM171A1Q5VUB5 890 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 PRSS55Q6UWB4 352 aaPredicted RBP23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 RIPOR3Q96MK2 946 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 NECTIN4Q96NY8 510 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 POMKQ9H5K3 350 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 RXFP1Q9HBX9 757 aa23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 TFIP11Q9UBB9 837 aaKnown RBP23.12■■□□□ 1.29
HCFC1R1-201ENST00000248089 STAT6P42226 847 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 MTHFRP42898 656 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 TMEM31Q5JXX7 168 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 PALB2Q86YC2 1186 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 UROC1Q96N76 676 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 TTPALQ9BTX7 342 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 TBX20Q9UMR3 447 aa23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 MORC2Q9Y6X9 1032 aaPredicted RBP23.11■■□□□ 1.29
HCFC1R1-201ENST00000248089 SPTLC2O15270 562 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 B3GAT3O94766 335 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 NMT1P30419 496 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 CREMQ03060 361 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 SOX4Q06945 474 aaPredicted RBP23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 MCL1Q07820 350 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 ELAVL2Q12926 359 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 ELMSAN1Q6PJG2 1045 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 CCDC73Q6ZRK6 1079 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 SV2BQ7L1I2 683 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 LINC00301Q8NCQ3 95 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms