RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 GRK7Q8WTQ7 553 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 MAIP1Q8WWC4 291 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 C18orf8Q96DM3 657 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DNM1LO00429 736 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DDX3XO00571 662 aaKnown RBP eCLIP12.28□□□□□ -0.442e-20■□□□□ 10.9
SOX9-201ENST00000245479 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 SPARCL1Q14515 664 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 CCDC137Q6PK04 289 aaKnown RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 HHIPL2Q6UWX4 724 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 RNF207Q6ZRF8 634 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 ST13P4Q8IZP2 240 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 SLC35C1Q96A29 364 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.44
SOX9-201ENST00000245479 CLDN3O15551 220 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 STAMBPO95630 424 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 EYA4O95677 639 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 SERPINB6P35237 376 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 VAMP7P51809 220 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 POLGP54098 1239 aaPredicted RBP12.27□□□□□ -0.44
SOX9-201ENST00000245479 RNASELQ05823 741 aaKnown RBP12.27□□□□□ -0.44
SOX9-201ENST00000245479 GABPAQ06546 454 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 KRT35Q92764 455 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 AGPAT3Q9NRZ7 376 aa12.27□□□□□ -0.44
SOX9-201ENST00000245479 ZBED4O75132 1171 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 PPATQ06203 517 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 DMP1Q13316 513 aaPredicted RBP12.27□□□□□ -0.45
SOX9-201ENST00000245479 FIGNQ5HY92 759 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 DCUN1D2Q6PH85 259 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 TTC1Q99614 292 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 ADRA2BP18089 450 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
SOX9-201ENST00000245479 NUMBP49757 651 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 TFAMQ00059 246 aaKnown RBP12.27□□□□□ -0.45
SOX9-201ENST00000245479 CDK17Q00537 523 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 HGSNATQ68CP4 663 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 PIK3R5Q8WYR1 880 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 ERP44Q9BS26 406 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 GLT8D2Q9H1C3 349 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.45
SOX9-201ENST00000245479 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 ABCF3Q9NUQ8 709 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 ZNF148Q9UQR1 794 aa12.27□□□□□ -0.45
SOX9-201ENST00000245479 CFAP69A5D8W1 941 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 EDIL3O43854 480 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 SPAG7O75391 227 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 KCNJ2P63252 427 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 WDR44Q5JSH3 913 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 TMEM270Q6UE05 265 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 EPS8L3Q8TE67 593 aaKnown RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 TTYH3Q9C0H2 523 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 ANGPTL2Q9UKU9 493 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 ALG6Q9Y672 507 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 NUP98P52948 1817 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 SYNJ2BP-COX16A0A087WUM0 186 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 YDJCA8MPS7 323 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 RASSF9O75901 435 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 SOX5P35711 763 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 AP3B2Q13367 1082 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 TMEM119Q4V9L6 283 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 GADL1Q6ZQY3 521 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 SIAH1Q8IUQ4 282 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 CTAGE3PQ8IX95 158 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 AGGF1Q8N302 714 aaeCLIP12.26□□□□□ -0.45
SOX9-201ENST00000245479 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 COX16Q9P0S2 106 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 GAKO14976 1311 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 ATXN2Q99700 1313 aaKnown RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 F8VZ95 297 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 Q3C1V9 767 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 NBPF12Q5TAG4 269 aaPredicted RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 BSPRYQ5W0U4 402 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 JAMLQ86YT9 394 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 CEP70Q8NHQ1 597 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
SOX9-201ENST00000245479 NUP85Q9BW27 656 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 HSPBP1Q9NZL4 362 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 TELO2Q9Y4R8 837 aa12.26□□□□□ -0.45
SOX9-201ENST00000245479 DISP2A7MBM2 1401 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms