RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ICAM3P32942 547 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 KIF5BP33176 963 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 EIF4A3P38919 411 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 GIPRP48546 466 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 HDAC4P56524 1084 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 FXNQ16595 210 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RTN1Q16799 776 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 NUGGCQ68CJ6 796 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ARID2Q68CP9 1835 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SNRNP48Q6IEG0 339 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 CCDC62Q6P9F0 684 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CYB5D1Q6P9G0 228 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CCDC80Q76M96 950 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SH3RF1Q7Z6J0 888 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SLC15A3Q8IY34 581 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 IGSF22Q8N9C0 903 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 TRIM58Q8NG06 486 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RIN2Q8WYP3 895 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 NELL1Q92832 810 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 STAMBPL1Q96FJ0 436 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ZNF570Q96NI8 536 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SPAG5Q96R06 1193 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 POLR3CQ9BUI4 534 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 UPF3BQ9BZI7 483 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 SLC7A5P2Q9GIP4 190 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 MCOLN1Q9GZU1 580 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ACAD9Q9H845 621 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ANKZF1Q9H8Y5 726 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RAVER2Q9HCJ3 691 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 ABCB6Q9NP58 842 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ZMYM5Q9UJ78 669 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 BARX2Q9UMQ3 279 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 PHF24Q9UPV7 400 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SLC12A7Q9Y666 1083 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 BZW2Q9Y6E2 419 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 BRCA2P51587 3418 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 IGLV3-22A0A075B6J6 115 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 A6NHS1 94 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 BOLA2-SMG1P6H3BVE0 249 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 LSM1O15116 133 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 MEFVO15553 781 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 FIBPO43427 364 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ZBED4O75132 1171 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RHOBTB3O94955 611 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ATP4AP20648 1035 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CIITAP33076 1130 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ADD1P35611 737 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 TXLNAP40222 546 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 PSMC4P43686 418 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 METAP2P50579 478 aaKnown RBP eCLIP3.95□□□□□ -1.78
UFM1-201ENST00000239878 SESN3P58005 492 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ETF1P62495 437 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 CEBPZQ03701 1054 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 PPP2R3AQ06190 1150 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 MYO1EQ12965 1108 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CUL3Q13618 768 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CASP8Q14790 479 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SNX17Q15036 470 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 PACS1Q6VY07 963 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 NKAIN3Q8N8D7 197 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SMYD1Q8NB12 490 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RASSF8Q8NHQ8 419 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 MAGEC3Q8TD91 643 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 TBC1D31Q96DN5 1066 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 AMNQ9BXJ7 453 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SH2B1Q9NRF2 756 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 OGDHLQ9ULD0 1010 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 LIMCH1Q9UPQ0 1083 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SCN10AQ9Y5Y9 1956 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 WDR81Q562E7 1941 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 TNRC18O15417 2968 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 DOCK3Q8IZD9 2030 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 GOLGA8AA7E2F4 631 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 NEMFO60524 1076 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SMIM24O75264 130 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ZNF202O95125 648 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 STAU1O95793 577 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 SCG2P13521 617 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 SREBF1P36956 1147 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RGS2P41220 211 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ALDH5A1P51649 535 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 SNAP25P60880 206 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 CCNA1P78396 465 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 IFRD2Q12894 506 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 CCL14Q16627 93 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 HSP90B2PQ58FF3 399 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 COL13A1Q5TAT6 717 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 XRRA1Q6P2D8 792 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 BLOC1S3Q6QNY0 202 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 NIPA1Q7RTP0 329 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 NECAB2Q7Z6G3 386 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 MYOCDQ8IZQ8 938 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 FUKQ8N0W3 1084 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 KIAA1958Q8N8K9 716 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 KLHDC9Q8NEP7 349 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ZFAND2BQ8WV99 257 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 JPH3Q8WXH2 748 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms