RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 TCHPQ9BT92 498 aa6.73□□□□□ -1.33
SGIP1-201ENST00000237247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.73□□□□□ -1.33
SGIP1-201ENST00000237247 TBC1D30Q9Y2I9 924 aa6.73□□□□□ -1.33
SGIP1-201ENST00000237247 ASTN1O14525 1302 aa6.73□□□□□ -1.33
SGIP1-201ENST00000237247 BAZ2BQ9UIF8 2168 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 KIAA0391O15091 583 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 MTRF1O75570 445 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 CPA3P15088 417 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 NR2F2P24468 414 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 HPDP32754 393 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SOX5P35711 763 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PMS2P54278 862 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DHX9Q08211 1270 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 GIT2Q14161 759 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 LRRC41Q15345 812 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 CNGA3Q16281 694 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 LNX1Q8TBB1 728 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SLC35C1Q96A29 364 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ABHD8Q96I13 439 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DDX47Q9H0S4 455 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 RABEP2Q9H5N1 569 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PACSIN2Q9UNF0 486 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 STX8Q9UNK0 236 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 R3HDM2Q9Y2K5 976 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PORP16435 677 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 RPA1P27694 616 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 GSTT1P30711 240 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 CIITAP33076 1130 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 HOXD13P35453 343 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DR1Q01658 176 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ADRM1Q16186 407 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 KIAA1755Q5JYT7 1200 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ZNF365Q70YC5 407 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 TRMT10CQ7L0Y3 403 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 NANOGNBQ7Z5D8 188 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ETNPPLQ8TBG4 499 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DYDC1Q8WWB3 177 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 CTNNBL1Q8WYA6 563 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 FGFBP2Q9BYJ0 223 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 MIS12Q9H081 205 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 JMJD4Q9H9V9 463 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 GRHL1Q9NZI5 618 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 HSFX1Q9UBD0 423 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SEL1LQ9UBV2 794 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PCDHA12Q9UN75 941 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SSC5DA1L4H1 1573 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 TRIM43BA6NCK2 446 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 USP17L5A8MUK1 530 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PFDN1O60925 122 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SERPINB8P50452 374 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 GRAPQ13588 217 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 PPP1R7Q15435 360 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DCAF12L1Q5VU92 463 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 TAOK1Q7L7X3 1001 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 GRAPLQ8TC17 118 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 CLIP3Q96DZ5 547 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 EEF2KMTQ96G04 330 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 FAM20AQ96MK3 541 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 NR1H4Q96RI1 486 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ZMYM2Q9UBW7 1377 aa6.72□□□□□ -1.33
SGIP1-201ENST00000237247 ANKRD62A6NC57 917 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 UBAP1LF5GYI3 381 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 ZBTB5O15062 677 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 GJB6O95452 261 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 GOLGA8HP0CJ92 632 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 RARGP13631 454 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 ATP5DP30049 168 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 HOXD11P31277 338 aaPredicted RBP6.71□□□□□ -1.33
SGIP1-201ENST00000237247 POLE2P56282 527 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 ACVR2BQ13705 512 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 CEP128Q6ZU80 1094 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 CPLX4Q7Z7G2 160 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 JAMLQ86YT9 394 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 PPP1R14CQ8TAE6 165 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 USP33Q8TEY7 942 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 SH3TC2Q8TF17 1288 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 TGFBRAP1Q8WUH2 860 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 WDR60Q8WVS4 1066 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 HNRNPABQ99729 332 aaKnown RBP6.71□□□□□ -1.33
SGIP1-201ENST00000237247 KCND2Q9NZV8 630 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 AMACRQ9UHK6 382 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 ACTL7BQ9Y614 415 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 RPTORQ8N122 1335 aa6.71□□□□□ -1.33
SGIP1-201ENST00000237247 MAPK13O15264 365 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 STRNO43815 780 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 NR3C1P04150 777 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 MYCLP1P12525 358 aaPredicted RBP6.71□□□□□ -1.34
SGIP1-201ENST00000237247 ITGA4P13612 1032 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 SLC9A1P19634 815 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 TMOD1P28289 359 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 COPB2P35606 906 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 BTDP43251 543 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 PDE6CP51160 858 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 CLCN2P51788 898 aa6.71□□□□□ -1.34
SGIP1-201ENST00000237247 GALCP54803 685 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms