RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MTM1Q13496 603 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 NOA1Q8NC60 698 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 ULK4Q96C45 1275 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 MTA3Q9BTC8 594 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 STX18Q9P2W9 335 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 POLIQ9UNA4 740 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 PITPNM2Q9BZ72 1349 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 UCHL3P15374 230 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 CARSP49589 748 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 BYSLQ13895 437 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 ZCCHC11Q5TAX3 1644 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 TRIM72Q6ZMU5 477 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 C7orf25Q9BPX7 421 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 IQGAP3Q86VI3 1631 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 LOC102724159A0A0B4J2E5 919 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 COPB2P35606 906 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 PWP2Q15269 919 aaKnown RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 TEDDM1Q5T9Z0 273 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 PID1Q7Z2X4 250 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 EGFL8Q99944 293 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 TSSK1BQ9BXA7 367 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 SP110Q9HB58 689 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 EHD2Q9NZN4 543 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 LMCD1Q9NZU5 365 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 CHORDC1Q9UHD1 332 aaPredicted RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 NARFQ9UHQ1 456 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 SUGT1Q9Y2Z0 365 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 ELF1P32519 619 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 CACNB2Q08289 660 aaPredicted RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 FLOT2Q14254 428 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 C12orf60Q5U649 245 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 ENOSF1Q7L5Y1 443 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 NBPF15Q8N660 670 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 AGAP3Q96P47 875 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 RBM15Q96T37 977 aaKnown RBP eCLIP14.12□□□□□ -0.15
NEK4-201ENST00000233027 STK33Q9BYT3 514 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 WWP1Q9H0M0 922 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 RHOBTB3O94955 611 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 ACOT2P49753 483 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 SEC24CP53992 1094 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 RARS2Q5T160 578 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 TTLL6Q8N841 843 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 OR6P1Q8NGX9 317 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 COG4Q9H9E3 785 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 XPO7Q9UIA9 1087 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 STAP1Q9ULZ2 295 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 USP15Q9Y4E8 981 aaPredicted RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 SLC9A1P19634 815 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 LSP1P33241 339 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 ANTXR2P58335 489 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 PRAMEP78395 509 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 GRIN1Q05586 938 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 LRRC31Q6UY01 552 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 CYFIP2Q96F07 1278 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 SPATA33Q96N06 139 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 MCEEQ96PE7 176 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 XPO6Q96QU8 1125 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 MOSPD1Q9UJG1 213 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 FMO5P49326 533 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 DYNC1I2Q13409 638 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 ZC2HC1CQ53FD0 456 aaPredicted RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 NSUN4Q96CB9 384 aaKnown RBP14.12□□□□□ -0.15
NEK4-201ENST00000233027 SLC10A4Q96EP9 437 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 OLFM3Q96PB7 478 aa14.12□□□□□ -0.15
NEK4-201ENST00000233027 SLC1A1P43005 524 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 GJB7Q6PEY0 223 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 RFWD2Q8NHY2 731 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 ACAP3Q96P50 834 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 TUFT1Q9NNX1 390 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 TSPY1Q01534 308 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 TAS2R42Q7RTR8 314 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 TMA16Q96EY4 203 aaKnown RBP14.11□□□□□ -0.15
NEK4-201ENST00000233027 BFARQ9NZS9 450 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 TUBE1Q9UJT0 475 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SOX11P35716 441 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 RGS7P49802 495 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SULT1E1P49888 294 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SPP2Q13103 211 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 EPHA7Q15375 998 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 RCOR2Q8IZ40 523 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 GANCQ8TET4 914 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 C2orf40Q9H1Z8 148 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 NEU2Q9Y3R4 380 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 CROCC2H7BZ55 1655 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SUPT3HO75486 399 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 PDIA5Q14554 519 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms