RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 METTL16Q86W50 562 aaKnown RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 RNPC3Q96LT9 517 aaKnown RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 FBXO2Q9UK22 296 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 IL10P22301 178 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 KCNA4P22459 653 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 TPI1P60174 286 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 VEPH1Q14D04 833 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 KDELC2Q7Z4H8 507 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 TNIP3Q96KP6 325 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 PCDHGB4Q9UN71 923 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 SCP2P22307 547 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 RARS2Q5T160 578 aaKnown RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 SYCP2LQ5T4T6 812 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 LRRC7Q96NW7 1537 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 EFNA5P52803 228 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 RAD23BP54727 409 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 ASAP3Q8TDY4 903 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 LRRC1Q9BTT6 524 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 RUBCNLQ9H714 662 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 TARSL2A2RTX5 802 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 PRKCBP05771 671 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 KRT4P19013 534 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 HSD17B4P51659 736 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 STAT4Q14765 748 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 MDH1BQ5I0G3 518 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 DDX50Q9BQ39 737 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 UNC45AQ9H3U1 944 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 AMACRQ9UHK6 382 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 KRT72Q14CN4 511 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 SPATA2LQ8IUW3 424 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ZFATQ9P243 1243 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 GGT7Q9UJ14 662 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ZNF197O14709 1029 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 HOXD10P28358 340 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 COPB2P35606 906 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 KCNB1Q14721 858 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 RAB42Q8N4Z0 105 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 RNF149Q8NC42 400 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 DCUN1D1Q96GG9 259 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 WWP1Q9H0M0 922 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ASB14A6NK59 587 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ORC4O43929 436 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 FDX1P10109 184 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 SRBD1Q8N5C6 995 aaKnown RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ATL2Q8NHH9 583 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ZNF507Q8TCN5 953 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 SLC7A5P2Q9GIP4 190 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 CLMNQ96JQ2 1002 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 ARHGAP26Q9UNA1 814 aa12.18□□□□□ -0.46
LAMA4-201ENST00000230538 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-201ENST00000230538 PDXKO00764 312 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 GFAPP14136 432 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 ACTR2P61160 394 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 MTHFD1LQ6UB35 978 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 ANKS3Q6ZW76 656 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 LDHDQ86WU2 507 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 RUBCNQ92622 972 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 OTUB1Q96FW1 271 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 OSBPL1AQ9BXW6 950 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 AURKCQ9UQB9 309 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 EFCAB14O75071 495 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 AKR1B1P15121 316 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 SESN2P58004 480 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 HIC1Q14526 733 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 LIMA1Q9UHB6 759 aaKnown RBP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 ARHGEF9O43307 516 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 HSPBP1Q9NZL4 362 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 ABCC3O15438 1527 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 TLR2O60603 784 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 FMR1Q06787 632 aaKnown RBP eCLIP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 SCARF1Q14162 830 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-201ENST00000230538 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 SPATA4Q8NEY3 305 aa12.17□□□□□ -0.46
LAMA4-201ENST00000230538 OTULINQ96BN8 352 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms