RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 POTEGQ6S5H5 508 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 POTEEQ6S8J3 1075 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 HDAC7Q8WUI4 952 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 MED10Q9BTT4 135 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 SLC38A10Q9HBR0 1119 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
HCFC2-201ENST00000229330 MRPS15P82914 257 aaKnown RBP14.59□□□□□ -0.07
HCFC2-201ENST00000229330 SLC12A1Q13621 1099 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 PDIA5Q14554 519 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 ACTRT1Q8TDG2 376 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 CEP170P1Q96L14 293 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 GTSE1Q9NYZ3 720 aa14.59□□□□□ -0.07
HCFC2-201ENST00000229330 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
HCFC2-201ENST00000229330 TDP2O95551 362 aa14.58□□□□□ -0.07
HCFC2-201ENST00000229330 COILP38432 576 aaPredicted RBP14.58□□□□□ -0.07
HCFC2-201ENST00000229330 ATG9AQ7Z3C6 839 aa14.58□□□□□ -0.07
HCFC2-201ENST00000229330 PRPF39Q86UA1 669 aaKnown RBP14.58□□□□□ -0.07
HCFC2-201ENST00000229330 DDI1Q8WTU0 396 aa14.58□□□□□ -0.07
HCFC2-201ENST00000229330 MARCOQ9UEW3 520 aaPredicted RBP14.58□□□□□ -0.07
HCFC2-201ENST00000229330 GGA2Q9UJY4 613 aa14.58□□□□□ -0.07
HCFC2-201ENST00000229330 TFRCP02786 760 aaKnown RBP14.58□□□□□ -0.08
HCFC2-201ENST00000229330 COPB2P35606 906 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 WASHC2DQ5SRD0 308 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 SPICE1Q8N0Z3 855 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 GALNT4Q8N4A0 578 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 RBBP8NLQ8NC74 664 aaPredicted RBP14.58□□□□□ -0.08
HCFC2-201ENST00000229330 PKD2L2Q9NZM6 624 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 MINPP1Q9UNW1 487 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 ALG6Q9Y672 507 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 TRAPPC3O43617 180 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 KRT75O95678 551 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 KCNJ1P48048 391 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 SERPINB10P48595 397 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 RABL6Q3YEC7 729 aaPredicted RBP14.58□□□□□ -0.08
HCFC2-201ENST00000229330 LZICQ8WZA0 190 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 GCOM2Q9BZD3 368 aaPredicted RBP14.58□□□□□ -0.08
HCFC2-201ENST00000229330 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 IL10P22301 178 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 PEX3P56589 373 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 PRAMEP78395 509 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 TTMPQ5BVD1 217 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.58□□□□□ -0.08
HCFC2-201ENST00000229330 PBXIP1Q96AQ6 731 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 OLFML3Q9NRN5 406 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 SEL1LQ9UBV2 794 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 LRCH1Q9Y2L9 728 aa14.58□□□□□ -0.08
HCFC2-201ENST00000229330 MYMKA6NI61 221 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 SORBS3O60504 671 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 NPR1P16066 1061 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 SLC9A1P19634 815 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 TFAMQ00059 246 aaKnown RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 CC2D2BQ6DHV5 1058 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 LRRC8EQ6NSJ5 796 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ARHGAP26Q9UNA1 814 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 USP17L5A8MUK1 530 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 F8VZ95 297 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 XPO1O14980 1071 aaKnown RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 APOA1P02647 267 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 MMP10P09238 476 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 FOXO4P98177 505 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 PPP1R18Q6NYC8 613 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 CMTM5Q96DZ9 223 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 GID8Q9NWU2 228 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 HEY2Q9UBP5 337 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 EMSYQ7Z589 1322 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 SALL3Q9BXA9 1300 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 A0A0G2JLW4 131 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 STRNO43815 780 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 KRT7P08729 469 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RARGP13631 454 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 COMTP21964 271 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 PTPN4P29074 926 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ST3GAL1Q11201 340 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 MAPRE2Q15555 327 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ARHGAP27Q6ZUM4 889 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 TSEN2Q8NCE0 465 aaKnown RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ATP6V1E2Q96A05 226 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 APEX2Q9UBZ4 518 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 SUN2Q9UH99 717 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 E2F6O75461 281 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 FAM153BP0C7A2 387 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 FAM153CQ494X1 144 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 NMD3Q96D46 503 aaKnown RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 NRBP2Q9NSY0 501 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 DTNAQ9Y4J8 743 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RSPH10B2B2RC85 870 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 RSPH10BP0C881 870 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ZNF844Q08AG5 666 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 TMEM270Q6UE05 265 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 CCDC117Q8IWD4 279 aaPredicted RBP14.57□□□□□ -0.08
HCFC2-201ENST00000229330 DDHD1Q8NEL9 900 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 ADPGKQ9BRR6 497 aa14.57□□□□□ -0.08
HCFC2-201ENST00000229330 SENP2Q9HC62 589 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms