RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ABRAQ8N0Z2 381 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.51□□□□□ -1.05
NANOG-201ENST00000229307 MORC4Q8TE76 937 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 TMEM60Q9H2L4 133 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 TBKBP1A7MCY6 615 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 VIMP08670 466 aaKnown RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 KRT7P08729 469 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 ZFXP17010 805 aaPredicted RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 KCNA3P22001 575 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 TARS2Q9BW92 718 aaKnown RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 A0A0G2JLL6 359 aaPredicted RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 MIF4GDA9UHW6 222 aaKnown RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 NEMP1O14524 444 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 VTNP04004 478 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 GUCY2CP25092 1073 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 GNL1P36915 607 aaPredicted RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 LAMTOR4Q0VGL1 99 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 DRAP1Q14919 205 aaPredicted RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 CCDC144BQ3MJ40 725 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 PRRT2Q7Z6L0 340 aaPredicted RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 VSIG10LQ86VR7 867 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 PPM1EQ8WY54 764 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 PSMB7Q99436 277 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 SH2D3AQ9BRG2 576 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 GOLPH3LQ9H4A5 285 aa8.51□□□□□ -1.05
NANOG-201ENST00000229307 DDX56Q9NY93 547 aaKnown RBP8.51□□□□□ -1.05
NANOG-201ENST00000229307 TJP3O95049 919 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PAX3P23760 479 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 MAP2K2P36507 400 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 RWDD2BP57060 319 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PAN2Q504Q3 1202 aaKnown RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 TREML2Q5T2D2 321 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 CTAGE3PQ8IX95 158 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 HPDLQ96IR7 371 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 DEFB118Q96PH6 123 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 CACYBPQ9HB71 228 aaKnown RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 ZCCHC17Q9NP64 241 aaKnown RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 ZBED1O96006 694 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 GTF2H1P32780 548 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 ZBTB16Q05516 673 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 HDXQ7Z353 690 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 FAM107BQ9H098 131 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 FAM50BQ9Y247 325 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PCDHAC2Q9Y5I4 1007 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 BNIP3LO60238 219 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 ZC3H11AO75152 810 aaKnown RBP eCLIP8.5□□□□□ -1.05
NANOG-201ENST00000229307 TRIM49P0CI25 452 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 TRIM49CP0CI26 452 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 MYBP10242 640 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SOX5P35711 763 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 EPHB3P54753 998 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 EHHADHQ08426 723 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 DPYDQ12882 1025 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 DRP2Q13474 957 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 DNAAF3Q8N9W5 541 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 EPAS1Q99814 870 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PFDN4Q9NQP4 134 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PARVAQ9NVD7 372 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 KIAA1257Q9ULG3 409 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PCDHA13Q9Y5I0 950 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 A0A1W2PQC6 194 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 GMNNO75496 209 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 CTDNEP1O95476 244 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SERPINB6P35237 376 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 LHX1P48742 406 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 THOC5Q13769 683 aaKnown RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 FAM102AQ5T9C2 384 aaPredicted RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 DENND2CQ68D51 928 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 PLPPR4Q7Z2D5 763 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 NT5DC4Q86YG4 428 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 CCDC110Q8TBZ0 833 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SKA2Q8WVK7 121 aaPredicted RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 HSPH1Q92598 858 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 MRPS31Q92665 395 aaKnown RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 OSMRQ99650 979 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SP110Q9HB58 689 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 DUOX1Q9NRD9 1551 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 A0A087WZ62 844 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 B3GAT3O94766 335 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 ATICP31939 592 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SLC27A1Q6PCB7 646 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 LRRC8AQ8IWT6 810 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 USP38Q8NB14 1042 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SMC6Q96SB8 1091 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 FDXACB1Q9BRP7 624 aaPredicted RBP8.5□□□□□ -1.05
NANOG-201ENST00000229307 AGXT2Q9BYV1 514 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 ZWILCHQ9H900 591 aa8.5□□□□□ -1.05
NANOG-201ENST00000229307 SCN11AQ9UI33 1791 aa8.49□□□□□ -1.05
NANOG-201ENST00000229307 FAM200BP0CF97 657 aa8.49□□□□□ -1.05
NANOG-201ENST00000229307 LCP1P13796 627 aa8.49□□□□□ -1.05
NANOG-201ENST00000229307 UBA1P22314 1058 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms