RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 ZNF528Q3MIS6 628 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
FRG1-201ENST00000226798 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
FRG1-201ENST00000226798 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 GRASPQ7Z6J2 395 aaPredicted RBP12.84□□□□□ -0.35
FRG1-201ENST00000226798 CDR2LQ86X02 465 aaPredicted RBP12.84□□□□□ -0.35
FRG1-201ENST00000226798 SLFN12Q8IYM2 578 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 SHDQ96IW2 340 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 CLSTN3Q9BQT9 956 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
FRG1-201ENST00000226798 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 TRIP11Q15643 1979 aa12.83□□□□□ -0.35
FRG1-201ENST00000226798 KANSL1LA0AUZ9 987 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 TADA2AO75478 443 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 KIF4AO95239 1232 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 C8AP07357 584 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 RARRES1P49788 294 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 NTHL1P78549 312 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 PRKCQQ04759 706 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 STK3Q13188 491 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 TUSC3Q13454 348 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
FRG1-201ENST00000226798 LIN9Q5TKA1 542 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 MTSS1LQ765P7 747 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 DCLK2Q8N568 766 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
FRG1-201ENST00000226798 FGF13Q92913 245 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 HINFPQ9BQA5 517 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 EIF2AK1Q9BQI3 630 aaKnown RBP12.83□□□□□ -0.36
FRG1-201ENST00000226798 TTPALQ9BTX7 342 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 USP24Q9UPU5 2620 aa12.83□□□□□ -0.36
FRG1-201ENST00000226798 F5P12259 2224 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 COL4A2P08572 1712 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 MAP1BP46821 2468 aaKnown RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 PTGESO14684 152 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 SPTLC1O15269 473 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 ADAM12O43184 909 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 KINO60870 393 aaKnown RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 SCRN1Q12765 414 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 NAB2Q15742 525 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 PSMD5Q16401 504 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 FAM171A1Q5VUB5 890 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 CDCA2Q69YH5 1023 aaPredicted RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 ITFG1Q8TB96 612 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 HASPINQ8TF76 798 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 TNFRSF25Q93038 417 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 BCO2Q9BYV7 579 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
FRG1-201ENST00000226798 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
FRG1-201ENST00000226798 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 CCL16O15467 120 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 MARCH6O60337 910 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 CDKL5O76039 1030 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
FRG1-201ENST00000226798 XBP1P17861 261 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 FAM187BQ17R55 369 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
FRG1-201ENST00000226798 NPAS3Q8IXF0 933 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 NELL1Q92832 810 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
FRG1-201ENST00000226798 MTF2Q9Y483 593 aaPredicted RBP12.81□□□□□ -0.36
FRG1-201ENST00000226798 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 FRYQ5TBA9 3013 aa12.81□□□□□ -0.36
FRG1-201ENST00000226798 CEP295Q9C0D2 2601 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 LAMTOR5O43504 91 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 XYLBO75191 536 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 RECQL4O94761 1208 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 MAGEA9P43362 315 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 PFKPQ01813 784 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 ELAVL2Q12926 359 aaKnown RBP12.8□□□□□ -0.36
FRG1-201ENST00000226798 NR5A1Q13285 461 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 RAB33AQ14088 237 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 RSPO4Q2I0M5 234 aaPredicted RBP12.8□□□□□ -0.36
FRG1-201ENST00000226798 SLC44A4Q53GD3 710 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 PDXDC1Q6P996 788 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 ZBTB44Q8NCP5 570 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 SLC7A14Q8TBB6 771 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 CLDN23Q96B33 292 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
FRG1-201ENST00000226798 KXD1Q9BQD3 176 aa12.8□□□□□ -0.36
FRG1-201ENST00000226798 CXCL16Q9H2A7 254 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms