RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 FCGR1AP12314 374 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 LTKP29376 864 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 SLCO1A2P46721 670 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 PRKAA2P54646 552 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 DEFA1P59665 94 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 DEFA3P59666 94 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 MYBPC2Q14324 1141 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 EFHC2Q5JST6 749 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 ANKRD13CQ8N6S4 541 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 DCPSQ96C86 337 aaKnown RBP4.66□□□□□ -1.66
CHD9-201ENST00000219084 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
CHD9-201ENST00000219084 BHMT2Q9H2M3 363 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 RSAD1Q9HA92 442 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 EHD2Q9NZN4 543 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 PCDHA6Q9UN73 950 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 PCDHA8Q9Y5H6 950 aa4.66□□□□□ -1.66
CHD9-201ENST00000219084 TMEM94Q12767 1356 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 C4BPBP20851 252 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 ACADSBP45954 432 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 IREB2P48200 963 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 MAP3K7CLP57077 242 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 TXNRD1Q16881 649 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 ANO4Q32M45 955 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 PAPD7Q5XG87 772 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 C11orf63Q6NUN7 778 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 RSRC2Q7L4I2 434 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 ASAP3Q8TDY4 903 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 ERP44Q9BS26 406 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 FTOQ9C0B1 505 aaKnown RBP eCLIP4.65□□□□□ -1.66
CHD9-201ENST00000219084 DCP1AQ9NPI6 582 aaPredicted RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 N4BP2Q86UW6 1770 aaPredicted RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 CEMIPQ8WUJ3 1361 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 IGSF9BQ9UPX0 1349 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 RXRGP48443 463 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 FMO5P49326 533 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 NAA20P61599 178 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.66
CHD9-201ENST00000219084 IZUMO3Q5VZ72 239 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 ZFRQ96KR1 1074 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 AP5M1Q9H0R1 490 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 PIH1D3Q9NQM4 214 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 PAK5Q9P286 719 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 CNOT7Q9UIV1 285 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 GDAQ9Y2T3 454 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 RFC5P40937 340 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 YWHAHQ04917 246 aaPredicted RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 CAPRIN1Q14444 709 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 PDXDC2PQ6P474 469 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 FOXR2Q6PJQ5 311 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 PPHLN1Q8NEY8 458 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 NSUN6Q8TEA1 469 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 GCNAQ96QF7 691 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 XPO6Q96QU8 1125 aaKnown RBP4.65□□□□□ -1.66
CHD9-201ENST00000219084 MED15Q96RN5 788 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 TMEM47Q9BQJ4 181 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 GID8Q9NWU2 228 aa4.65□□□□□ -1.66
CHD9-201ENST00000219084 KCNQ3O43525 872 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 PLEKHA8P1O95397 391 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 VSNL1P62760 191 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 DIXDC1Q155Q3 683 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 APOBEC3FQ8IUX4 373 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 TC2NQ8N9U0 490 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CEP95Q96GE4 821 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 RMDN2Q96LZ7 410 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TRIM54Q9BYV2 358 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 KLHL8Q9P2G9 620 aaPredicted RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 COPG1Q9Y678 874 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 ARFGEF2Q9Y6D5 1785 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 MAGEA13PA6NCF6 341 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 SLCO1B7G3V0H7 640 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 INO80B-WBP1J3KQ70 363 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CLIC2O15247 247 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 GZMAP12544 262 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CHN1P15882 459 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TKTP29401 623 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 S100A5P33763 92 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 HDLBPQ00341 1268 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 NAB1Q13506 487 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 PTGISQ16647 500 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CYB5R4Q7L1T6 521 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 NLRP9Q7RTR0 991 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TRIM69Q86WT6 500 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 SFR1Q86XK3 245 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 ZBED8Q8IZ13 594 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 RNF169Q8NCN4 708 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 NEDD1Q8NHV4 660 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 DNAJC9Q8WXX5 260 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TTC17Q96AE7 1141 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 IL17RAQ96F46 866 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 SUGCTQ9HAC7 445 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TMEM8AQ9HCN3 771 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CHCHD3Q9NX63 227 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 NFAT5O94916 1531 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 ANGPT2O15123 496 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CLASP2O75122 1294 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 TRPA1O75762 1119 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 FDFT1P37268 417 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 ARSEP51690 589 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 PDIA2Q13087 525 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms