RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CBWD2Q8IUF1 395 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 SNX27Q96L92 541 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ZBED2Q9BTP6 218 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 SRRTQ9BXP5 876 aaKnown RBP14.31□□□□□ -0.12
TIMP1-201ENST00000218388 MRPL9Q9BYD2 267 aaKnown RBP14.31□□□□□ -0.12
TIMP1-201ENST00000218388 TMEM117Q9H0C3 514 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 THAP9Q9H5L6 903 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ASB7Q9H672 318 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
TIMP1-201ENST00000218388 KANSL3Q9P2N6 904 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 NFE2L3Q9Y4A8 694 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 CEP290O15078 2479 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ARL5CA6NH57 179 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
TIMP1-201ENST00000218388 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
TIMP1-201ENST00000218388 AKAP3O75969 853 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 MLH1P40692 756 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 CASP4P49662 377 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 CYP24A1Q07973 514 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 SHHQ15465 462 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 SLC10A6Q3KNW5 377 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 C9orf50Q5SZB4 431 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 NT5DC4Q86YG4 428 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 TMEM192Q8IY95 271 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 CRIPAKQ8N1N5 446 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 AOPEPQ8N6M6 819 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 FAM200AQ8TCP9 573 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 HELQQ8TDG4 1101 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 GAD1Q99259 594 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 ARMCX3Q9UH62 379 aaPredicted RBP14.3□□□□□ -0.12
TIMP1-201ENST00000218388 INPP5FQ9Y2H2 1132 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 DERAQ9Y315 318 aa14.3□□□□□ -0.12
TIMP1-201ENST00000218388 ANK1P16157 1881 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
TIMP1-201ENST00000218388 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TTC26A0AVF1 554 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 MEIS3P2A8K0S8 358 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 RBAK-RBAKDNI3L0D1 243 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 INPPL1O15357 1258 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 OFD1O75665 1012 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 DGKIO75912 1065 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 GJB5O95377 273 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 ADRB2P07550 413 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 FGFR1P11362 822 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 BFSP1Q12934 665 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 GRIK3Q13003 919 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 PSMD6Q15008 389 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 CLLU1OSQ5K130 101 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 FRMD5Q7Z6J6 570 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 HERC6Q8IVU3 1022 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TDHQ8IZJ6 230 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 ZSWIM2Q8NEG5 633 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 ANKRD20A12PQ8NF67 263 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 EEF2KMTQ96G04 330 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 MFSD14AQ96MC6 490 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 FAM193BQ96PV7 902 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-201ENST00000218388 MED15Q96RN5 788 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 C2CD2Q9Y426 696 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 PDCD11Q14690 1871 aaKnown RBP14.29□□□□□ -0.12
TIMP1-201ENST00000218388 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-201ENST00000218388 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
TIMP1-201ENST00000218388 CARNS1A5YM72 827 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 LACTBL1A8MY62 500 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 STX10O60499 249 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 THP07101 528 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 DLATP10515 647 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 KCNE1P15382 129 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 TNNI1P19237 187 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 SCNN1GP51170 649 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 VAMP7P51809 220 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 AP3M2P53677 418 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 SPAG1Q07617 926 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 XKR4Q5GH76 650 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CREBRFQ8IUR6 639 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 WDR49Q8IV35 697 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CCDC127Q96BQ5 260 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
TIMP1-201ENST00000218388 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 RAD9AQ99638 391 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CGRRF1Q99675 332 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 CBX8Q9HC52 389 aa14.28□□□□□ -0.12
TIMP1-201ENST00000218388 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms