RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 FAM13CQ8NE31 585 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 OLIG1Q8TAK6 271 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 RNF217Q8TC41 542 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 ATG4AQ8WYN0 398 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 UTP4Q969X6 686 aaKnown RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 SYT11Q9BT88 431 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PPP1R12CQ9BZL4 782 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 LRMDAQ9H2I8 198 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 POLLQ9UGP5 575 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PEX11AO75192 247 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 CCDC15Q0P6D6 951 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 CYP1B1Q16678 543 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 BORCS6Q96GS4 357 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 GPR88Q9GZN0 384 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 OLFML3Q9NRN5 406 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 NINJ2Q9NZG7 142 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 TNRC6CQ9HCJ0 1690 aaKnown RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 E7ENQ6 273 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 EIF3DO15371 548 aaKnown RBP eCLIP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 KRT15P19012 456 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 ATP6V1C1P21283 382 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 EPHB2P29323 1055 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 FOXN2P32314 431 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 HADHBP55084 474 aaKnown RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 ODR4Q5SWX8 454 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 CGB2Q6NT52 195 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 RINT1Q6NUQ1 792 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 LRRC8CQ8TDW0 803 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 PWWP2AQ96N64 755 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 EIF2AK1Q9BQI3 630 aaKnown RBP10.32□□□□□ -0.76
TUBB1-201ENST00000217133 TBC1D10AQ9BXI6 508 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 AAASQ9NRG9 546 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 ETAA1Q9NY74 926 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 LRRC42Q9Y546 428 aa10.32□□□□□ -0.76
TUBB1-201ENST00000217133 FESP07332 822 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 TPBGLP0DKB5 382 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 BFSP1Q12934 665 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 SPARCL1Q14515 664 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 USH1GQ495M9 461 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 GRK7Q8WTQ7 553 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CRAMP1Q96RY5 1269 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 LRRC19Q9H756 370 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 AGPAT3Q9NRZ7 376 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 DLGAP2Q9P1A6 1054 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 FRMPD4Q14CM0 1322 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 POC1B-GALNT4F8VUJ3 575 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 RFX1P22670 979 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
TUBB1-201ENST00000217133 PTDSS1P48651 473 aaKnown RBP10.31□□□□□ -0.76
TUBB1-201ENST00000217133 STAT4Q14765 748 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
TUBB1-201ENST00000217133 FAM20AQ96MK3 541 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 TRAIPQ9BWF2 469 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CHKBQ9Y259 395 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 EMSYQ7Z589 1322 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 EXOC1LA0A1B0GW35 172 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 ENTPD5O75356 428 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CBX6O95503 412 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 NPR1P16066 1061 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 GNAZP19086 355 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 MAN1A1P33908 653 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 GCLMP48507 274 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CAV1Q03135 178 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 SPIRE1Q08AE8 756 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 SEPT7Q16181 437 aaKnown RBP10.31□□□□□ -0.76
TUBB1-201ENST00000217133 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
TUBB1-201ENST00000217133 HHATQ5VTY9 493 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 PPM1KQ8N3J5 372 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 TTC8Q8TAM2 541 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 ETNPPLQ8TBG4 499 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 MAIP1Q8WWC4 291 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 INPP5DQ92835 1189 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 MASTLQ96GX5 879 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 SLCO1B3Q9NPD5 702 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 STOML1Q9UBI4 398 aa10.31□□□□□ -0.76
TUBB1-201ENST00000217133 CYP3A7-CYP3A51PA0A087WV96 503 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 SPDYE5A6NIY4 337 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 TBX3O15119 743 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 NVLO15381 856 aaKnown RBP10.3□□□□□ -0.76
TUBB1-201ENST00000217133 SGPL1O95470 568 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 CYP3A7P24462 503 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 RHBDL3P58872 404 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 GSTA5Q7RTV2 222 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 ARHGEF19Q8IW93 802 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
TUBB1-201ENST00000217133 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms