RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PNMA8BQ9ULN7 279 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 TALDO1P37837 337 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 CASP10Q92851 521 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 SMIM31A0A1B0GVY4 71 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 SYNCRIPO60506 623 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 TAF8Q7Z7C8 310 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 LATS2Q9NRM7 1088 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 CD274Q9NZQ7 290 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 KRT76Q01546 638 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 DPP10Q8N608 796 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 JADE3Q92613 823 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 TRIM62Q9BVG3 475 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 USP1O94782 785 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 GNAT1P11488 350 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 GNA15P30679 374 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 COMMD2Q86X83 199 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 ANKMY2Q8IV38 441 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 CMTM5Q96DZ9 223 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 DHX35Q9H5Z1 703 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 UVRAGQ9P2Y5 699 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 HPS5Q9UPZ3 1129 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 EFHC2Q5JST6 749 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 GALNT8Q9NY28 637 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 GSTM1P09488 218 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 IZUMO1Q8IYV9 350 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 CALR3Q96L12 384 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 ERAP1Q9NZ08 941 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 APPL1Q9UKG1 709 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 RFX3P48380 749 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 ECSITQ9BQ95 431 aa15.36■□□□□ 0.05
SPTLC2-201ENST00000216484 ATP5JP18859 108 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PTH1RQ03431 593 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 RAD51Q06609 339 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ALCAMQ13740 583 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 CATSPER4Q7RTX7 472 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 EVPLLA8MZ36 301 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 LCP1P13796 627 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 CDC25AP30304 524 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PIGOQ8TEQ8 1089 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 TM6SF1Q9BZW5 370 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 TRIM24O15164 1050 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 LDHAP00338 332 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 NLRP11P59045 1033 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 TERF2Q15554 542 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 SHCBP1Q8NEM2 672 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF564Q8TBZ8 553 aaPredicted RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 OSBPL9Q96SU4 736 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 NDUFS3O75489 264 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 MOCS2O96007 188 aaPredicted RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 RCN1Q15293 331 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 FAM45AQ8TCE6 357 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 LCMT1Q9UIC8 334 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PALD1Q9ULE6 856 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 EIF3DO15371 548 aaKnown RBP eCLIP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 DGKIO75912 1065 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 GCFC2P16383 781 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 RSPH1Q8WYR4 309 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 MYL2P10916 166 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PDIA3P30101 505 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PUDPQ08623 228 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PKP1Q13835 747 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 TFDP2Q14188 446 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ZSWIM7Q19AV6 140 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PCDHGA4Q9Y5G9 962 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 IKBKBO14920 756 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 HOXA13P31271 388 aaPredicted RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF211Q13398 564 aaPredicted RBP15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 PDZK1Q5T2W1 519 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 BTN2A1Q7KYR7 527 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 CLMNQ96JQ2 1002 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 ADAM30Q9UKF2 790 aa15.35■□□□□ 0.05
SPTLC2-201ENST00000216484 TRIM43BA6NCK2 446 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 GPC3P51654 580 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 CHMP2BQ9UQN3 213 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 SH3TC2Q8TF17 1288 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 SERHL2Q9H4I8 314 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 SERHLQ9NQF3 203 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 BFARQ9NZS9 450 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 E2F8A0AVK6 867 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ALDH1A2O94788 518 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 CHI3L1P36222 383 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms