RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 NEFLP07196 543 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 C8AP07357 584 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 FSHRP23945 695 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 ECM1Q16610 540 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 LIN9Q5TKA1 542 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 HAUS3Q68CZ6 603 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 GRASPQ7Z6J2 395 aaPredicted RBP21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 C8orf76Q96K31 380 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 ARHGEF3Q9NR81 526 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 GDAQ9Y2T3 454 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 MYH15Q9Y2K3 1946 aa21.7■■□□□ 1.06
SYNGR1-201ENST00000216155 STK25O00506 426 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 HNRNPA1P09651 372 aaKnown RBP eCLIP21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 RFX1P22670 979 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 NTHL1P78549 312 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 ELAVL2Q12926 359 aaKnown RBP21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 PPP2R5AQ15172 486 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 DCAF4L1Q3SXM0 396 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 GLRA4Q5JXX5 417 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 TTC38Q5R3I4 469 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 PPM1LQ5SGD2 360 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 CCDC83Q8IWF9 413 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 FOXP1Q9H334 677 aaPredicted RBP21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 SLC2A4RGQ9NR83 387 aa21.69■■□□□ 1.06
SYNGR1-201ENST00000216155 GVINP1Q7Z2Y8 2422 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 TMEM189-UBE2V1I3L0A0 370 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 MUTP22033 750 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 IGFBP6P24592 240 aaPredicted RBP21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 HOXA9P31269 272 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 NT5DC1Q5TFE4 455 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 FGF14Q92915 247 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 RPP25Q9BUL9 199 aaKnown RBP21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 POLD4Q9HCU8 107 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 CDH7Q9ULB5 785 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 ZFP37Q9Y6Q3 630 aaPredicted RBP21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 SPTBN4Q9H254 2564 aa21.68■■□□□ 1.06
SYNGR1-201ENST00000216155 TRIP11Q15643 1979 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 CCL16O15467 120 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 FGFR3P22607 806 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 NBR1Q14596 966 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 ATF7IP2Q5U623 682 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 PHLDB3Q6NSJ2 640 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 PDXDC1Q6P996 788 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 PARM1Q6UWI2 310 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 ADSSL1Q8N142 457 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 SLC7A14Q8TBB6 771 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 PPP1R10Q96QC0 940 aaKnown RBP21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 BHMT2Q9H2M3 363 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 MTRRQ9UBK8 725 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 LIMCH1Q9UPQ0 1083 aa21.67■■□□□ 1.06
SYNGR1-201ENST00000216155 COL4A3Q01955 1670 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 B3GAT3O94766 335 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 SEC24BO95487 1268 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 DCNP07585 359 aaKnown RBP21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 CCT6AP40227 531 aaKnown RBP21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 FXR2P51116 673 aaKnown RBP eCLIP21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 CLCNKBP51801 687 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 EFNA5P52803 228 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 RAB33AQ14088 237 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 CD300LGQ6UXG3 332 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 KIFAP3Q92845 792 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 FGF13Q92913 245 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 IFT74Q96LB3 600 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 GOLGA2P5Q9HBQ8 144 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 DLGAP2Q9P1A6 1054 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 NOTCH4Q99466 2003 aa21.66■■□□□ 1.06
SYNGR1-201ENST00000216155 XYLBO75191 536 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 POU2F2P09086 479 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 OR1D2P34982 312 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 UPP1Q16831 310 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 SPECC1Q5M775 1068 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 AXDND1Q5T1B0 1012 aaPredicted RBP21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 DCLRE1AQ6PJP8 1040 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 RSPO2Q6UXX9 243 aaPredicted RBP21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 C4orf32Q8N8J7 132 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 CEP120Q8N960 986 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 C3orf58Q8NDZ4 430 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 FBXO18Q8NFZ0 1043 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 ITFG1Q8TB96 612 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 LLPHQ9BRT6 129 aaKnown RBP21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 POLIQ9UNA4 740 aa21.65■■□□□ 1.06
SYNGR1-201ENST00000216155 PHLPP2Q6ZVD8 1323 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 TRAPPC10P48553 1259 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 GPC5P78333 572 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 PJA1Q8NG27 643 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 DDX27Q96GQ7 796 aaKnown RBP21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 FOXQ1Q9C009 403 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 HCFC1R1Q9NWW0 138 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 KIAA1024Q9UPX6 916 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 SIT1Q9Y3P8 196 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 CDY1Q9Y6F8 540 aa21.64■■□□□ 1.05
SYNGR1-201ENST00000216155 TKTP29401 623 aaKnown RBP21.63■■□□□ 1.05
SYNGR1-201ENST00000216155 SNX29Q8TEQ0 813 aa21.63■■□□□ 1.05
SYNGR1-201ENST00000216155 UROC1Q96N76 676 aa21.63■■□□□ 1.05
SYNGR1-201ENST00000216155 CDT1Q9H211 546 aa21.63■■□□□ 1.05
SYNGR1-201ENST00000216155 DDX19AQ9NUU7 478 aaKnown RBP21.63■■□□□ 1.05
SYNGR1-201ENST00000216155 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms