RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 EXTL3O43909 919 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 DLATP10515 647 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 EEF1GP26641 437 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 UBASH3AP57075 661 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 RBL2Q08999 1139 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 PLEKHO2Q8TD55 490 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 BORCS6Q96GS4 357 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 XPO4Q9C0E2 1151 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 PDE11AQ9HCR9 933 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 ANK1P16157 1881 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 ZNF233A6NK53 670 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 SLC16A3O15427 465 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 TEX33O43247 280 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 STAG3L1P0CL83 205 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 CXCL8P10145 99 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 AKAP5P24588 427 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 AXLP30530 894 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 SPAG1Q07617 926 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 PCBP1Q15365 356 aaKnown RBP eCLIP10.8□□□□□ -0.68
RTCB-201ENST00000216038 TCTN1Q2MV58 587 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 MIIPQ5JXC2 388 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 UBXN11Q5T124 520 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 TRIM59Q8IWR1 403 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 RNF169Q8NCN4 708 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 DBF4BQ8NFT6 615 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 FBXL18Q96ME1 805 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 ADAM2Q99965 735 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 CXCL16Q9H2A7 254 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 RNF39Q9H2S5 420 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 SNTG2Q9NY99 539 aa10.8□□□□□ -0.68
RTCB-201ENST00000216038 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 LIMA1Q9UHB6 759 aaKnown RBP10.8□□□□□ -0.68
RTCB-201ENST00000216038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.8□□□□□ -0.68
RTCB-201ENST00000216038 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 GNA14O95837 355 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 LDHAP00338 332 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 MCF2P10911 925 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 RAG1P15918 1043 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 CDC25BP30305 580 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 COPB1P53618 953 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 CYP24A1Q07973 514 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 BFSP1Q12934 665 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 ENOX2Q16206 610 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 FBXO38Q6PIJ6 1188 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 FRMD5Q7Z6J6 570 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 C7orf61Q8IZ16 206 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 TMEM130Q8N3G9 435 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 GOLGA6L1Q8N7Z2 621 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 TMEM174Q8WUU8 243 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 INTS13Q9NVM9 706 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 KLK14Q9P0G3 267 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 MEFVO15553 781 aaPredicted RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 SLU7O95391 586 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 KRT13P13646 458 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 CSF2RAP15509 400 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 H2AFXP16104 143 aaPredicted RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 SYN1P17600 705 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 VAMP7P51809 220 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 MARSP56192 900 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 INTS8Q75QN2 995 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 RTN4RL1Q86UN2 441 aaPredicted RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 SMG8Q8ND04 991 aaKnown RBP10.79□□□□□ -0.68
RTCB-201ENST00000216038 PARD3BQ8TEW8 1205 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 LPPQ93052 612 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 SLC35C1Q96A29 364 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 NDST4Q9H3R1 872 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 RSPH14Q9UHP6 348 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 IPPQ9Y573 584 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 PCDHB2Q9Y5E7 798 aa10.79□□□□□ -0.68
RTCB-201ENST00000216038 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 LRRC10BA6NIK2 292 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 LRRIQ3A6PVS8 624 aaPredicted RBP10.78□□□□□ -0.68
RTCB-201ENST00000216038 TIMP1P01033 207 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 CASQ1P31415 396 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 UBXN1Q04323 297 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 MAN2A1Q16706 1144 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 DCAF4L1Q3SXM0 396 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 PLEKHG4Q58EX7 1191 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 C1orf220Q5T0J3 134 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 CCDC186Q7Z3E2 898 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 LINC01599Q8WXQ3 324 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 MFSD14AQ96MC6 490 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 ACAP3Q96P50 834 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
RTCB-201ENST00000216038 RPF1Q9H9Y2 349 aaKnown RBP10.78□□□□□ -0.68
RTCB-201ENST00000216038 METTL14Q9HCE5 456 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms