RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 MCEEQ96PE7 176 aa19.94■□□□□ 0.78
MBD3-201ENST00000156825 AFF4Q9UHB7 1163 aaKnown RBP19.94■□□□□ 0.78
MBD3-201ENST00000156825 NEXMIFQ5QGS0 1516 aa19.94■□□□□ 0.78
MBD3-201ENST00000156825 CTIFO43310 598 aaKnown RBP19.94■□□□□ 0.78
MBD3-201ENST00000156825 EEF1B2P24534 225 aaKnown RBP19.94■□□□□ 0.78
MBD3-201ENST00000156825 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
MBD3-201ENST00000156825 TAF11Q15544 211 aa19.94■□□□□ 0.78
MBD3-201ENST00000156825 EZH2Q15910 746 aaKnown RBP19.94■□□□□ 0.78
MBD3-201ENST00000156825 SNF8Q96H20 258 aa19.94■□□□□ 0.78
MBD3-201ENST00000156825 STK25O00506 426 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 GYG2O15488 501 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 GYPCP04921 128 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 COPS2P61201 443 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 PPP2R2AP63151 447 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 TRIM72Q6ZMU5 477 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 RAPGEF5Q92565 580 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 C9orf72Q96LT7 481 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 CD163L1Q9NR16 1453 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 TAC1P20366 129 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 RAET1EQ8TD07 263 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 APOBEC2Q9Y235 224 aaKnown RBP19.93■□□□□ 0.78
MBD3-201ENST00000156825 CEMIPQ8WUJ3 1361 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 RSPH10B2B2RC85 870 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 RSPH10BP0C881 870 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 GRIK1P39086 918 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 GUCY1A3Q02108 690 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 HACL1Q9UJ83 578 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 KCNN4O15554 427 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 APRTP07741 180 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 TAL1P17542 331 aaPredicted RBP19.93■□□□□ 0.78
MBD3-201ENST00000156825 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 GPRC5CQ9NQ84 441 aa19.93■□□□□ 0.78
MBD3-201ENST00000156825 PDS5AQ29RF7 1337 aaKnown RBP19.93■□□□□ 0.78
MBD3-201ENST00000156825 RIN2Q8WYP3 895 aaPredicted RBP19.92■□□□□ 0.78
MBD3-201ENST00000156825 C19orf81C9J6K1 198 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 TYK2P29597 1187 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 PHEXP78562 749 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 KLHL38Q2WGJ6 581 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 RFX8Q6ZV50 586 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 ZNF560Q96MR9 790 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 EFHD1Q9BUP0 239 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 SMARCAD1Q9H4L7 1026 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 SNX2O60749 519 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 RPA1P27694 616 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.92■□□□□ 0.78
MBD3-201ENST00000156825 RMDN1Q96DB5 314 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 PPP1R36Q96LQ0 422 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 TGS1Q96RS0 853 aaKnown RBP19.92■□□□□ 0.78
MBD3-201ENST00000156825 TADA3O75528 432 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 MYBL1P10243 752 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 KCNJ1P48048 391 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 GRID2IPA4D2P6 1211 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 HLA-DRAP01903 254 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 TMEM132DQ14C87 1099 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 SMTNL2Q2TAL5 461 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 TNIP3Q96KP6 325 aa19.92■□□□□ 0.78
MBD3-201ENST00000156825 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 C2CD6Q53TS8 623 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 ASIC4Q96FT7 647 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 BTBD6Q96KE9 485 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 PFASO15067 1338 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 APOEP02649 317 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 SMARCA1P28370 1054 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 COG1Q8WTW3 980 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 PGBD4Q96DM1 585 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 CCDC138Q96M89 665 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 HAUS8Q9BT25 410 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 CYP4F11Q9HBI6 524 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 DONSONQ9NYP3 566 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 TBX3O15119 743 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 ACTR2P61160 394 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 KRT80Q6KB66 452 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 EFCAB12Q6NXP0 572 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 ADGRA1Q86SQ6 560 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 OR2W6PQ8NHA6 318 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 LBHD1Q9BQE6 289 aaPredicted RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 MOV10L1Q9BXT6 1211 aaKnown RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 SUN2Q9UH99 717 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 SLC16A3O15427 465 aaKnown RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 PLEKP08567 350 aaPredicted RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 NLRP11P59045 1033 aaKnown RBP19.91■□□□□ 0.78
MBD3-201ENST00000156825 CAV1Q03135 178 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 SLC30A10Q6XR72 485 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 UBA3Q8TBC4 463 aa19.91■□□□□ 0.78
MBD3-201ENST00000156825 GMNCA6NCL1 334 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 H3BRJ5 948 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 DPYSL4O14531 572 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 HADHAP40939 763 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 DDX42Q86XP3 938 aaKnown RBP eCLIP19.9■□□□□ 0.78
MBD3-201ENST00000156825 ATP11CQ8NB49 1132 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 CXorf38Q8TB03 319 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 PIDD1Q9HB75 910 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 EIF4E1BA6NMX2 242 aaKnown RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 MSH4O15457 936 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 PPARGP37231 505 aaPredicted RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 FASTKD1Q53R41 847 aaKnown RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 NUDCD3Q8IVD9 361 aa19.9■□□□□ 0.78
MBD3-201ENST00000156825 ACSF2Q96CM8 615 aaPredicted RBP19.9■□□□□ 0.78
MBD3-201ENST00000156825 DDX56Q9NY93 547 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms