RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TMEM247A6NEH6 219 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 TTC23LQ6PF05 361 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 TRAPPC11Q7Z392 1133 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SENP7Q9BQF6 1050 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SLC13A4Q9UKG4 626 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 MYO1CO00159 1063 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 NEMP1O14524 444 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 TROAPQ12815 778 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SENP1Q9P0U3 644 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 TJP2Q9UDY2 1190 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 MOCS2O96007 188 aaPredicted RBP24.49■■□□□ 1.51
TARBP1-201ENST00000040877 FDPSP14324 419 aaKnown RBP24.49■■□□□ 1.51
TARBP1-201ENST00000040877 ZNF235Q14590 738 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 TMEM8AQ9HCN3 771 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 PSMD3O43242 534 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 ACOT2P49753 483 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 IL1RL1Q01638 556 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 MMTAG2Q9BU76 263 aaKnown RBP24.49■■□□□ 1.51
TARBP1-201ENST00000040877 PLEKHA5Q9HAU0 1116 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SNX12Q9UMY4 172 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.49■■□□□ 1.51
TARBP1-201ENST00000040877 A0A1W2PQJ5 194 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 RGL2O15211 777 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 ICAM1P05362 532 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 PIGHQ14442 188 aaPredicted RBP24.49■■□□□ 1.51
TARBP1-201ENST00000040877 NUDT18Q6ZVK8 323 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 ASIC4Q96FT7 647 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SPON2Q9BUD6 331 aa24.49■■□□□ 1.51
TARBP1-201ENST00000040877 SPECC1L-ADORA2AF8WAN1 911 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 LMBRD2Q68DH5 695 aaPredicted RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 PCDHB2Q9Y5E7 798 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 CCL15-CCL14A0A0B4J2E2 113 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 GOLGA8MH3BSY2 632 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 STMN1P16949 149 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 CCL15Q16663 113 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 ZNF677Q86XU0 584 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 RBBP8NLQ8NC74 664 aaPredicted RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 DDX27Q96GQ7 796 aaKnown RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 KCNH7Q9NS40 1196 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 SPATA4Q8NEY3 305 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 ASAP3Q8TDY4 903 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 ZDHHC15Q96MV8 337 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 ELAC2Q9BQ52 826 aaKnown RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 SIK2Q9H0K1 926 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 MAD2L2Q9UI95 211 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 KIF19Q2TAC6 998 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 RNF168Q8IYW5 571 aaPredicted RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 ZBED8Q8IZ13 594 aa24.48■■□□□ 1.51
TARBP1-201ENST00000040877 PPARGC1AQ9UBK2 798 aaKnown RBP24.48■■□□□ 1.51
TARBP1-201ENST00000040877 IFNA8P32881 189 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 PPP2R2AP63151 447 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 FMR1Q06787 632 aaKnown RBP eCLIP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 NR1I3Q14994 352 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 ATF7IP2Q5U623 682 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 LCP1P13796 627 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 ACADSBP45954 432 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 TPI1P60174 286 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 ESRRGP62508 458 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 MRPS25P82663 173 aaKnown RBP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 IRAK4Q9NWZ3 460 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 TPX2Q9ULW0 747 aaKnown RBP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 G3BP2Q9UN86 482 aaKnown RBP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 CFAP69A5D8W1 941 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 EXTL3O43909 919 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 TMCC1O94876 653 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 SKIP12755 728 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 STAT4Q14765 748 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 PID1Q7Z2X4 250 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 HPS3Q969F9 1004 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 A0A0G2JND7 137 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 E5RI56 91 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 EIF3EP60228 445 aaKnown RBP24.47■■□□□ 1.51
TARBP1-201ENST00000040877 DGKDQ16760 1214 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 ATG4CQ96DT6 458 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 ZNF212Q9UDV6 495 aa24.47■■□□□ 1.51
TARBP1-201ENST00000040877 POLR1AO95602 1720 aaPredicted RBP24.46■■□□□ 1.51
TARBP1-201ENST00000040877 CFLARO15519 480 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 ATP1A1P05023 1023 aaKnown RBP24.46■■□□□ 1.51
TARBP1-201ENST00000040877 SV2CQ496J9 727 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 PPP2R3CQ969Q6 453 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 ULK4Q96C45 1275 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 EHD4Q9H223 541 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 MYBP10242 640 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 PCSK1P29120 753 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 RASIP1Q5U651 963 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 RASGRP2Q7LDG7 609 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 PPP1R2P1Q96PQ5 205 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 LMNAP02545 664 aaKnown RBP24.46■■□□□ 1.51
TARBP1-201ENST00000040877 BRAFP15056 766 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 GALCP54803 685 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 MAGOHP61326 146 aaKnown RBP24.46■■□□□ 1.51
TARBP1-201ENST00000040877 SNX17Q15036 470 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 NAB2Q15742 525 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 CDC26Q8NHZ8 85 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 TRIM54Q9BYV2 358 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 CHGBP05060 677 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 PDGFRAP16234 1089 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 CAP2P40123 477 aa24.46■■□□□ 1.51
TARBP1-201ENST00000040877 RPS6KA5O75582 802 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms