RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Ppp1r16bQ8VHQ3 568 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Msgn1Q9JK54 188 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Zranb2Q9R020 330 aaKnown RBP27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Morc1Q9WVL5 950 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Tcp10bE9PYJ0 438 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 IapP03975 557 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Xkr4Q5GH67 647 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Dpp9Q8BVG4 862 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Zc3h6Q8BYK8 1177 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Elmo3Q8BYZ7 720 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Vmn1r218Q8R261 298 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 CtsqQ91ZF4 343 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 IvdQ9JHI5 424 aa27.62■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ttc17E9PVB5 1198 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Pnpla5Q32LZ8 432 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Zcwpw1Q6IR42 630 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Rpf1Q7TND5 349 aaKnown RBP27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Slc15a5Q8CBB2 566 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 GldcQ91W43 1025 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Acsl3Q9CZW4 720 aaKnown RBP27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Slc5a4aQ9ET37 656 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ankrd2Q9WV06 328 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Calcoco2A2A6M5 331 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 1700064H15RikD3Z4D4 81 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Grm2Q14BI2 872 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Lamtor4Q8CF66 99 aa27.61■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Vmn2r77L7N2B7 854 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ndufs6P52503 116 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Vsnl1P62761 191 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Olfr392Q7TRX6 312 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Rnaseh2bQ80ZV0 308 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 DcakdQ8BHC4 231 aaKnown RBP27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Oit3Q8R4V5 546 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Slc26a3Q9WVC8 757 aa27.6■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm44511A0A0N4SW10 223 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm14525B1AZA0 212 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm2012B1B0R1 212 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Tlk2O55047 718 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Tnnc2P20801 160 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Klrb1bP27812 223 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Rmdn3Q3UJU9 470 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Fam92bQ3V2J0 292 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm14819Q62478 212 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Hsd3b7Q9EQC1 369 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Spata31d1dE9Q5W2 1247 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm17535J3KMR8 224 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Cyp27b1O35084 507 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Cdca2Q14B71 982 aaKnown RBP27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ccdc125Q5U465 500 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Leng8Q8CBY3 785 aaKnown RBP27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Commd10Q8JZY2 202 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 D630039A03RikQ8K0M7 236 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Stxbp5Q8K400 1152 aaKnown RBP27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Vopp1Q8R1C3 172 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 BbxQ8VBW5 907 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ssr1Q9CY50 286 aaKnown RBP27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Polr3eQ9CZT4 710 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Pold3Q9EQ28 462 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Trpc3Q9QZC1 836 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ralgapa2A3KGS3 1872 aa27.59■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Slc35g2D3YVE8 412 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gm8994E9PV04 411 aaKnown RBP27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 CraddO88843 199 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 PtprcP06800 1291 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Gjb1P28230 283 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Irs1P35569 1233 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Myl6Q60605 151 aaKnown RBP27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Bclaf1Q8K019 919 aaKnown RBP27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Arhgap8Q9CXP4 425 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Rnf225Q9D7D1 332 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Lonp2Q9DBN5 852 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Rnf14Q9JI90 485 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Mta2Q9R190 668 aa27.58■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Arf4P61750 180 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Mphosph8Q3TYA6 858 aaKnown RBP27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Vps72Q62481 368 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Il33Q8BVZ5 266 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Trmt13Q8BYH3 481 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Taf2Q8C176 1104 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Spata2Q8K004 515 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Znf830Q8R1N0 363 aaKnown RBP27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Stx17Q9D0I4 301 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 ToporslQ9D2F8 683 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Foxn2E9Q7L6 429 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Tff2Q03404 129 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 MlxipQ2VPU4 917 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Palb2Q3U0P1 1104 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Mpzl3Q3V3F6 237 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Ntan1Q64311 310 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Tspan18Q80WR1 248 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Haus1Q8BHX1 278 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Calhm6Q8C9E8 313 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Ccdc28aQ8CEI3 192 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Tmco4Q91WU4 631 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Tmod3Q9JHJ0 352 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 UtrnE9Q6R7 3430 aa27.57■■■□□ 2
Tpm1-216ENSMUST00000113707 Arid2E9Q7E2 1828 aa27.56■■■□□ 2
Tpm1-216ENSMUST00000113707 Gm11985A0A1B0GS61 206 aa27.56■■■□□ 2
Tpm1-216ENSMUST00000113707 Vmn2r87E9PZX4 848 aa27.56■■■□□ 2
Tpm1-216ENSMUST00000113707 Ess2O70279 479 aa27.56■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms