RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Ccdc162pQ0VG85 912 aa32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Dlg4Q62108 724 aa32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Olfr30Q8VGD8 315 aa32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Plagl2Q925T4 496 aa32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Ccdc43Q9CR29 222 aaKnown RBP32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Prpf40aQ9R1C7 953 aaKnown RBP32.95■■■□□ 2.87
Ctdnep1-201ENSMUST00000108593 Kdelc2G5E897 503 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Gm11236J3QMS7 360 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Capn2O08529 700 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Cyp11b1Q3TG86 501 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Mxd4Q60948 209 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Tor4aQ8BH02 426 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Taf2Q8C176 1104 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Doc2gQ9ESN1 387 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Dnajc12Q9R022 198 aa32.95■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Bcl7cO08664 217 aa32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 March9Q3TZ87 348 aa32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Rhbdf1Q6PIX5 856 aa32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Hgh1Q8C3I8 393 aa32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ppfibp1Q8C8U0 969 aaKnown RBP32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 CtsfQ9R013 462 aa32.94■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Cntnap4Q99P47 1310 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Grik3B1AS29 919 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Fam184aE9PW83 1143 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 TxkP42682 527 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Hps5P59438 1126 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Krt39Q6IFX4 482 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Metap1Q8BP48 386 aaKnown RBP32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Setd3Q91WC0 594 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 CutaQ9CQ89 177 aa32.93■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Gm8369E9PZI3 166 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Calb1P12658 261 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Dcaf17Q3TUL7 519 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Zmym6Q8BS54 1249 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Leg1Q8C6C9 337 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Pak2Q8CIN4 524 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Slamf8Q9D3G2 278 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Itga2bQ9QUM0 1033 aa32.92■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Scgb2b18A0A087WPA9 112 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 1700001O22RikA2APZ1 375 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Zkscan7E9PVW1 718 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ugt1a6bK9J7B2 531 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 EregQ61521 162 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ugt1a6Q64435 531 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ugt1a7cQ6ZQM8 531 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Znf473Q8BI67 892 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Fuca1Q99LJ1 452 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Spatc1lQ9D9W0 342 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Prmt2Q9R144 448 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Gm8298J3QPI0 401 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Upf3aQ3ULJ3 422 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Cracr2aQ3UP38 310 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Znf235Q61116 645 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ankrd24Q80VM7 985 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Tsen34Q8BMZ5 316 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Mcoln1Q99J21 580 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Tmem86aQ9D8N3 241 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ddx25Q9QY15 484 aa32.91■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 PtmaP26350 111 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 rp9P97762 213 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Pan2Q8BGF7 1200 aaKnown RBP32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Fut11Q8BHC9 489 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Gpr180Q8BPS4 441 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Rasal3Q8C2K5 1041 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Klhl11Q8CE33 709 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ap3m2Q8R2R9 418 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Sdcbp2Q99JZ0 292 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Ppp1r3aQ99MR9 1089 aa32.9■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Pramel1Q99MW3 458 aa32.89■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Cd97Q9Z0M6 818 aa32.89■■■□□ 2.86
Ctdnep1-201ENSMUST00000108593 Arid2E9Q7E2 1828 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Ttc3O88196 1979 aaKnown RBP32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Ppp3caP63328 521 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 GopcQ8BH60 463 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Cep95Q8BVV7 827 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Kank2Q8BX02 843 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Phldb2Q8K1N2 1249 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Mroh4G3X8W1 983 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Kcnh2O35219 1162 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Cyp17a1P27786 507 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Wscd1Q80XH4 572 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Slc9a9Q8BZ00 644 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Tubgcp4Q9D4F8 667 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Nek3Q9R0A5 511 aa32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Atp6v0a1Q9Z1G4 839 aaKnown RBP32.88■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Wdr72D3YYM4 1114 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Tnnc2P20801 160 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Rab11fip4Q8BQP8 635 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Scyl2Q8CFE4 930 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 CbsQ91WT9 561 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 TheglQ9DA15 459 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Rfc2Q9WUK4 349 aaKnown RBP32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Peg12Q9WVA7 283 aa32.87■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Kcnj4P52189 445 aa32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Igbp1Q61249 340 aa32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 PtprjQ64455 1238 aa32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Colgalt2Q6NVG7 625 aa32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Tcf25Q8R3L2 676 aaKnown RBP32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Plekhh3Q8VCE9 796 aa32.86■■■□□ 2.85
Ctdnep1-201ENSMUST00000108593 Trhr2Q9ERT2 382 aa32.86■■■□□ 2.85
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms