RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 1700016D06RikQ9DAA5 166 aa13.25□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Fzd2Q9JIP6 570 aa13.25□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Adam17Q9Z0F8 827 aa13.25□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Plxna3P70208 1872 aa13.25□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Sf3b1Q99NB9 1304 aaKnown RBP13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Rsph10bE9PYQ0 876 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 2010300C02RikE9Q3M9 1175 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Gm10801F7C7Q0 168 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Dapk3O54784 448 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Fgfr1P16092 822 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Pax3P24610 479 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 SnrpfP62307 86 aaKnown RBP13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Tekt4Q149S1 447 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Rbm20Q3UQS8 1199 aaKnown RBP13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Atp11bQ6DFW5 1175 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Mpp4Q6P7F1 635 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Aggf1Q7TN31 711 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Clic6Q8BHB9 596 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 TbckQ8BM85 762 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Usp37Q8C0R0 979 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Fam129bQ8R1F1 749 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Setd3Q91WC0 594 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Pip4k2cQ91XU3 421 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Asb7Q91ZU0 318 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Noxred1Q9D3S5 366 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 GatmQ9D964 423 aaKnown RBP13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Pkd2l2Q9JLG4 621 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Homer2Q9QWW1 354 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Pcsk5Q04592 1877 aa13.24□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Mroh4G3X8W1 983 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Apol10bG3X9K7 334 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 FechP22315 420 aaKnown RBP13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Tbx3P70324 741 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Smad4P97471 551 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Vps51Q3UVL4 782 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 LpoQ5SW46 710 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 EfsQ64355 560 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Herc4Q6PAV2 1057 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Olfr23Q7TRX4 325 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Ankfy1Q810B6 1169 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Rab11fip4Q8BQP8 635 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Ccdc122Q8BVN0 290 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 LgsnQ8CIX8 563 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Matr3Q8K310 846 aaKnown RBP13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 HyiQ8R1F5 277 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Rpp40Q8R1F9 363 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 YarsQ91WQ3 528 aaKnown RBP13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Ribc1Q9D0B8 379 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 PtmsQ9D0J8 101 aaKnown RBP13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Chst7Q9EP78 484 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Usp29Q9ES63 869 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Igbp1bQ9QZ29 343 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Dock1Q8BUR4 1865 aa13.23□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Veph1A1A535 833 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 4930402K13RikB1AW18 415 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Maml3D4QGC2 1135 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Cyth3O08967 399 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 PtgisO35074 501 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Adam19O35674 920 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 JchainP01592 159 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 TnfP06804 235 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Dbx1P52950 335 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Slc26a1P58735 704 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 LxnP70202 222 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Kcnq1P97414 668 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Plpp4Q0VBU9 271 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Cyb5r4Q3TDX8 528 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Smcr8Q3UMB5 935 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Dmc1Q61880 340 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Mysm1Q69Z66 819 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Krba1Q6NXZ1 1043 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Casd1Q7TN73 797 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 TbataQ7TSD4 393 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 PdhxQ8BKZ9 501 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Amz1Q8BVF9 502 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Rbm41Q8JZV4 413 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Gpr153Q8K0Z9 631 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Uroc1Q8VC12 676 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Tomm70Q9CZW5 611 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Tmem86aQ9D8N3 241 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Epm2aQ9WUA5 330 aa13.22□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Atg2aQ6P4T0 1914 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Gm13276A0A087WR18 182 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Bpifb4A2BGH0 617 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Vmn2r79E9Q067 851 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Itm2bO89051 266 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 P01631 113 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Sec1P97353 368 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Nek10Q3UGM2 1111 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Snx25Q3ZT31 840 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Znrf3Q5SSZ7 913 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Arhgap11aQ80Y19 987 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Q8C4P0 716 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Ago2Q8CJG0 860 aaKnown RBP13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Syn3Q8JZP2 579 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Plekhh3Q8VCE9 796 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Tor1aip1Q921T2 595 aaKnown RBP13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Snw1Q9CSN1 536 aaKnown RBP13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Snx10Q9CWT3 201 aa13.21□□□□□ -0.29
Ccdc28a-202ENSMUST00000080860 Doc2gQ9ESN1 387 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms