RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Ppp2r5eQ61151 467 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Kbtbd3Q8BHI4 607 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 4930550L24RikQ99PA7 320 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ddx24Q9ESV0 857 aaKnown RBP17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Cacna2d3Q9Z1L5 1091 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Kiaa1522A2A7S8 1013 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Spata31d1dE9Q5W2 1247 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 AfpP02772 605 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Spink5Q148R4 1017 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Dsg1aQ61495 1057 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ntrk3Q6VNS1 825 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Wnk4Q80UE6 1222 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Myef2Q8C854 591 aaKnown RBP17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Scrn2Q8VCA8 425 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Xpo6Q924Z6 1125 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rbp7Q9EPC5 134 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Klrc2Q9WTJ9 238 aa17.1■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Gm4846B2RWH8 538 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Hnrnph2P70333 449 aaKnown RBP17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Oog3Q3UWY1 500 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rnf139Q7TMV1 668 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rtp1Q8C8C1 263 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Gbp7Q91Z40 638 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Tlr3Q99MB1 905 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Npm3Q9CPP0 175 aaKnown RBP17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Tacc3Q9JJ11 631 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Tmod2Q9JKK7 351 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Skint3A7TZF0 458 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 UrosP51163 265 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 RalaP63321 206 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 GmpsQ3THK7 693 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ddx49Q4FZF3 480 aaKnown RBP17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rhbdf2Q80WQ6 827 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 3830417A13RikQ8BQJ2 303 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ppfia2Q8BSS9 1257 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Olfr1502Q8VG66 316 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rnf135Q9CWS1 417 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Tdrd12Q9CWU0 1215 aa17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Tmx2Q9D710 295 aaKnown RBP17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Rfwd2Q9R1A8 733 aaKnown RBP17.09■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Cdr2lA2A6T1 465 aa17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Pitpnm1O35954 1243 aa17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Klc1O88447 541 aa17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Q3UJP5 209 aa17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ago2Q8CJG0 860 aaKnown RBP17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Med10Q9CXU0 135 aa17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Ftsj3Q9DBE9 838 aaKnown RBP17.08■□□□□ 0.33
Ckap4-201ENSMUST00000053871 Bpifb9bA2AJD1 591 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Hnrnph1O35737 449 aaKnown RBP17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Bcat1P24288 386 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Bpifb5Q3UQ05 490 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Six1Q62231 284 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Bpifb9aQ80XI7 591 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Fbxo38Q8BMI0 1194 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Efl1Q8C0D5 1127 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 CgasQ8C6L5 507 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 C8aQ8K182 587 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Bcs1lQ9CZP5 418 aa17.08■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Prdm12A2AJ77 365 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pus7B7ZNL8 666 aaKnown RBP17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Hoxc13P50207 328 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Psmc4P54775 418 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Eef1dP57776 281 aaKnown RBP17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mfsd14aP70187 490 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Uhmk1P97343 419 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 DeptorQ570Y9 409 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Q6DFW0 481 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 L3mbtl3Q8BLB7 883 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Adgra1Q8C4G9 578 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ndfip2Q91ZP6 311 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Taf1dQ9D4V4 322 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mia3Q8BI84 1930 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Gm5926E9PWJ8 236 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Gm4841E9QAA8 417 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tulp2P46686 562 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Grm2Q14BI2 872 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Spdye4aQ5IBH6 268 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 PrimpolQ6P1E7 537 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 AarsQ8BGQ7 968 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Uba6Q8C7R4 1053 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mill1Q8HWE7 395 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Emc2Q9CRD2 297 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Atp6v1e2Q9D593 226 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Adamtsl1Q8BLI0 1745 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Bcorl1A2AQH4 1781 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 RptorQ8K4Q0 1335 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pid1Q3UBG2 217 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Sema5bQ60519 1093 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 HnrnpdQ60668 355 aaKnown RBP17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mcph1Q7TT79 822 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ints9Q8K114 658 aaKnown RBP17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ptgdr2Q9Z2J6 382 aa17.07■□□□□ 0.32
Ckap4-201ENSMUST00000053871 CaluO35887 315 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Slc1a1P51906 523 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Phactr1Q2M3X8 580 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tcf4Q60722 670 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rccd1Q8BTU7 377 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Cuedc2Q9CXX9 284 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 FibpQ9JI19 357 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pdzd4Q9QY39 772 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms