RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Gm4758L7N258 96 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Oprl1P35377 367 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cdc25cP48967 447 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 SpertQ32MG2 446 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 4933427I04RikQ3V053 235 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Ubap1Q8BH48 502 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Atrnl1Q6A051 1378 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 StrcQ8VIM6 1809 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Krt8P11679 490 aaKnown RBP12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tarbp2P97473 365 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Btbd9Q8C726 612 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cplx3Q8R1B5 158 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 6030498E09RikB1AX85 169 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Prdm15E9Q8T2 1174 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Serpinb6eI7HJI3 429 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Flot1O08917 428 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Irf8P23611 424 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 VegfaQ00731 214 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Ccdc117Q6PB51 277 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 ItpkaQ8R071 459 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 GrapQ9CX99 217 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Mrpl2Q9D773 306 aaKnown RBP12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Ftsj3Q9DBE9 838 aaKnown RBP12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rnf6Q9DBU5 667 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Smok2bQ9QYZ3 484 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Smok2aQ9QYZ6 504 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Bcorl1A2AQH4 1781 aa12.11□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rap1gds1E9Q912 607 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 RalaP63321 206 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Zdhhc18Q5Y5T2 380 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Klra7Q60654 280 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Q6DFW0 481 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rassf9Q8K342 435 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Col23a1Q8K4G2 532 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tmx2Q9D710 295 aaKnown RBP12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tgm5Q9D7I9 724 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Mpp2Q9WV34 552 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Zscan4-ps3A0A1B0GRH6 506 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Zscan4-ps2A0A1C7CYU6 506 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Gm5936A2BG95 728 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Gm5640A3KG49 728 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Hoxc13P50207 328 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 GabpaQ00422 454 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Nt5c2Q3V1L4 560 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Trim21Q62191 470 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Q80WR5 230 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Lpgat1Q91YX5 370 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 IkbipQ9DBZ1 373 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tlr9Q9EQU3 1032 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 JmyQ9QXM1 983 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Gm28360A0A087WR25 190 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Pus7B7ZNL8 666 aaKnown RBP12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Spata31d1dE9Q5W2 1247 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Ugt1a2P70691 533 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Lgr6Q3UVD5 967 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tcf4Q60722 670 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cypt2Q6P924 180 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 RbakQ8BQC8 711 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Shtn1Q8K2Q9 631 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Znf445Q8R2V3 986 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Thoc1Q8R3N6 657 aaKnown RBP12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Gyg1Q9R062 333 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Nup62clA2AG10 272 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Aff1O88573 1216 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Casp14O89094 257 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Uhmk1P97343 419 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Elf1Q60775 612 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rtp1Q8C8C1 263 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Olfr1499Q8VG65 314 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Vps36Q91XD6 386 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 Prss23Q9D6X6 382 aa12.1□□□□□ -0.47
Vps54-201ENSMUST00000006221 PrphP15331 475 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Bmp2P21274 394 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rab21P35282 222 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Tulp2P46686 562 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Ephb2P54763 986 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Adcy8P97490 1249 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Fam193bQ3U2K0 892 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 SnphQ80U23 495 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Zfp120Q8BZW4 436 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Mettl1Q9Z120 268 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Oog4Q4G0C7 502 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Sec23ipQ6NZC7 998 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rassf6Q80UQ2 353 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Creb3l2Q8BH52 521 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Kdm4bQ91VY5 1086 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Sucla2Q9Z2I9 463 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Art2bO35975 289 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cyp2b9P12790 491 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 ThbdP15306 577 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Fmr1P35922 614 aaKnown RBP12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rhox5P52651 210 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Psmc5P62196 406 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Dnajc8Q6NZB0 253 aaKnown RBP12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cyfip1Q7TMB8 1253 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Cfap36Q8C6E0 343 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Q9DA42 136 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Fundc1Q9DB70 155 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Fem1bQ9Z2G0 627 aa12.09□□□□□ -0.47
Vps54-201ENSMUST00000006221 Rfx8D3YU81 596 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms