RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Srrm3Q80WV7 648 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Strip1Q8C079 837 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atp2a1Q8R429 994 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tsc1Q9EP53 1161 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gm13084A2A8N0 494 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mdm4O35618 489 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Aco1P28271 889 aaKnown RBP13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Marcksl1P28667 200 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 GscQ02591 256 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Kiaa0391Q8JZY4 584 aaKnown RBP13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Scrn2Q8VCA8 425 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Smyd3Q9CWR2 428 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Phtf1Q9QZ09 761 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rfx8D3YU81 596 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cav1P49817 178 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Senp6Q6P7W0 1132 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Scfd1Q8BRF7 639 aaKnown RBP13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Adamts2Q8C9W3 1213 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Smtnl2Q8CI12 456 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pabpc6Q9D4E6 643 aaKnown RBP13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ccdc97Q9DBT3 340 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Apol11aE9PZG0 334 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Epha3P29319 983 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Etv6P97360 485 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pou6f1Q07916 301 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Vwa3aQ3UVV9 1148 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rhot1Q8BG51 631 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Nkiras1Q8CEC5 192 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Med15Q924H2 789 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pdxdc1Q99K01 787 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Polr3cQ9D483 533 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mrpl2Q9D773 306 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CtsfQ9R013 462 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Znfx1Q8R151 1909 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Arl4cP61208 192 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rnf10Q3UIW5 804 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Nop9Q8BMC4 636 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tgif2lx2Q8K5B9 231 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cdk9Q99J95 372 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Syap1Q9D5V6 365 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Chmp2aQ9DB34 222 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lrrc63A6H694 637 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tsta3P23591 321 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Myl2P51667 166 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lilrb3P97484 841 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CenpuQ8C4M7 410 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CntrobQ8CB62 887 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pnpt1Q8K1R3 783 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 PrameQ9D4Z5 464 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ifi207E9Q3L4 978 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc16a2O70324 545 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 PrphP15331 475 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fam92bQ3V2J0 292 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zcchc2Q69ZB8 1166 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Churc1Q6DG52 112 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Peg10Q7TN75 958 aaKnown RBP13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cd300ldQ8VCH2 221 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fgd4Q91ZT5 766 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cuedc2Q9CXX9 284 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Thumpd2Q9CZB3 528 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tex9Q9D845 387 aa13.5□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Flt1P35969 1333 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Kcna3P16390 528 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 GalcP54818 684 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 9130409I23RikQ3TS87 320 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rusc1Q8BG26 893 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Polr2bQ8CFI7 1174 aaKnown RBP13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 RnpepQ8VCT3 650 aaKnown RBP13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Nek8Q91ZR4 698 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Net1Q9Z206 595 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Abcb5B5X0E4 1255 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gm5689F6Y2A6 97 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Chrna9G3X8Z7 479 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Drp2Q05AA6 957 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Upf3bQ3ULL6 472 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lrch2Q3UMG5 773 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Klra4Q60651 263 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Supt20hQ7TT00 530 aaKnown RBP13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gramd1bQ80TI0 738 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Sap130Q8BIH0 1057 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 NptxrQ99J85 493 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rnf135Q9CWS1 417 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Kcnq4Q9JK97 696 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Osbpl7A2A716 963 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fcer2P20693 331 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ptk2P34152 1090 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 YdjcQ14BV6 310 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Aars2Q14CH7 980 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Frmd8Q3UFK8 466 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fbxo10Q7TQF2 950 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc17a8Q8BFU8 601 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 YarsQ91WQ3 528 aaKnown RBP13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Speer3W4VSP1 261 aa13.49□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rabgap1lA6H6A9 815 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Hnrnph3D3Z3N4 346 aaKnown RBP13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gm20721E9Q2U8 318 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Orc4O88708 433 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CatspereP0DP43 985 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tmem165P52875 323 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Sema3eP70275 775 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms