RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Xpo6Q924Z6 1125 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 FopnlQ9CZS3 174 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Bub1bQ9Z1S0 1052 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sik3Q6P4S6 1311 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Col15a1O35206 1367 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm28897A0A087WP44 222 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nfx1B1AY10 1114 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Vmn2r87E9PZX4 848 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hoxd10P28359 340 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nr5a1P33242 462 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cul4aQ3TCH7 759 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ddr2Q62371 854 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pdk1Q8BFP9 434 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gga3Q8BMI3 718 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Armc6Q8BNU0 468 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ttc22Q8C159 568 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Znf428Q8C1M2 176 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ppp6r2Q8R3Q2 923 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcdhgb4Q91XX6 912 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Q9CYI0 393 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Atp13a1Q9EPE9 1200 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Uggt1Q6P5E4 1551 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Wdr49A0A0N4SUK7 710 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slc35g2D3YVE8 412 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Serpina16D3Z660 418 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Acot6Q32Q92 419 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Togaram2Q3TYG6 1002 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cep295nlQ497N6 533 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Oog4Q4G0C7 502 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam160a1Q505K2 1081 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tshz2Q68FE9 1030 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ephx4Q6IE26 359 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gpbp1l1Q6NZP2 473 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CopaQ8CIE6 1224 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam32aQ9CR80 112 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Khdc3Q9CWU5 440 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 TarsQ9D0R2 722 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Abcg8Q9DBM0 673 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Poc5Q9DBS8 558 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 IcoslgQ9JHJ8 322 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gbp11A9YVJ5 442 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 A930018M24RikB7ZMY3 218 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm8926L7MUE8 181 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gfpt1P47856 697 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CiitaP79621 1155 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Foxred2Q3USW5 665 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nod1Q8BHB0 953 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Prpf18Q8BM39 342 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Bpifb6Q8BU51 449 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim9Q8C7M3 817 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcdha9Q91Y11 979 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rpn2Q9DBG6 631 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 RalbQ9JIW9 206 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nckap5lQ6GQX2 1323 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Acnat1A2AKK5 416 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 ErmardE9Q048 622 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm7535F7CXE4 302 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Map4k1P70218 827 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ptprn2P80560 1001 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ttf2Q5NC05 1138 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Zfp341Q6PGC9 846 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 RgmbQ7TQ33 436 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Baiap2l2Q80Y61 522 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim65Q8BFW4 522 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 HibchQ8QZS1 385 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Utp6Q8VCY6 597 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcdhgc5Q91XW9 944 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cap2Q9CYT6 476 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 ParvbQ9ES46 365 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cyp39a1Q9JKJ9 470 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 HaspinQ9Z0R0 754 aa9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Top3bQ9Z321 862 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Zfp882E9Q4R4 555 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slc39a2G3X943 309 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Serpinb9O08797 374 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rgs2O08849 211 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pla2g4bP0C871 782 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam167bP17257 162 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Lsp1P19973 330 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Crabp2P22935 138 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rbm46P86049 533 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Lmntd2Q0VET5 664 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Chn2Q80XD1 332 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ubxn10Q8BG34 277 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Znf445Q8R2V3 986 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Abcf2Q99LE6 628 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nt5c3aQ9D020 331 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Thap2Q9D305 217 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Chit1Q9D7Q1 464 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 PigbQ9JJQ0 542 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 BcamQ9R069 622 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcdh11xF6ZNL5 1338 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Prdm2A2A7B5 1709 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 2210016F16RikG3X8U3 338 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Psmb9P28076 219 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pdha1P35486 390 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cyp2e1Q05421 493 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hipk4Q3V016 616 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Plekha8Q80W71 519 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Q8BGD0 127 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms