RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR60, Length 104 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR60	snR60	BOP2	Q06150	570 aa		0.23	□□□□□ -2.37
snR60	snR60	ATP6	P00854	259 aa		0.22	□□□□□ -2.37
snR60	snR60	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
snR60	snR60	LAS1	P36146	502 aa	Predicted RBP	0.22	□□□□□ -2.37
snR60	snR60	MAL32	P38158	584 aa		0.22	□□□□□ -2.37
snR60	snR60	SWC5	P38326	303 aa		0.22	□□□□□ -2.37
snR60	snR60	FET3	P38993	636 aa		0.22	□□□□□ -2.37
snR60	snR60	NPT1	P39683	429 aa	Known RBP	0.22	□□□□□ -2.37
snR60	snR60	HUA1	P40325	198 aa		0.22	□□□□□ -2.37
snR60	snR60	COX16	P47081	118 aa		0.22	□□□□□ -2.37
snR60	snR60	GTO1	P48239	356 aa		0.22	□□□□□ -2.37
snR60	snR60	RPL37B	P51402	88 aa	Known RBP	0.22	□□□□□ -2.37
snR60	snR60	MAL12	P53341	584 aa		0.22	□□□□□ -2.37
snR60	snR60	DBP6	P53734	629 aa	Known RBP	0.22	□□□□□ -2.37
snR60	snR60	YNL050C	P53952	270 aa		0.22	□□□□□ -2.37
snR60	snR60	ATC1	Q04005	294 aa		0.22	□□□□□ -2.37
snR60	snR60	EMI1	Q04406	187 aa		0.22	□□□□□ -2.37
snR60	snR60	PST1	Q12355	444 aa		0.22	□□□□□ -2.37
snR60	snR60	PAA1	Q12447	191 aa	Known RBP	0.22	□□□□□ -2.37
snR60	snR60	YAL064W-B	O13512	126 aa		0.21	□□□□□ -2.38
snR60	snR60	SWD2	P36104	329 aa	Predicted RBP	0.21	□□□□□ -2.38
snR60	snR60	CTR2	P38865	189 aa		0.21	□□□□□ -2.38
snR60	snR60	CDC40	P40968	455 aa	Predicted RBP	0.21	□□□□□ -2.38
snR60	snR60	PDR16	P53860	351 aa	Known RBP	0.21	□□□□□ -2.38
snR60	snR60	ATO3	Q12359	275 aa		0.21	□□□□□ -2.38
snR60	snR60	Q0255	P03881	472 aa		0.2	□□□□□ -2.38
snR60	snR60	SWI3	P32591	825 aa		0.2	□□□□□ -2.38
snR60	snR60	YKE4	P40544	346 aa		0.2	□□□□□ -2.38
snR60	snR60	PML1	Q07930	204 aa	Predicted RBP	0.2	□□□□□ -2.38
snR60	snR60	AKR2	Q12013	749 aa		0.2	□□□□□ -2.38
snR60	snR60	EMP46	Q12396	444 aa		0.2	□□□□□ -2.38
snR60	snR60	RPL5	P26321	297 aa	Known RBP	0.19	□□□□□ -2.38
snR60	snR60	PEX3	P28795	441 aa		0.19	□□□□□ -2.38
snR60	snR60	UIP5	P36137	443 aa		0.19	□□□□□ -2.38
snR60	snR60	PRM9	P39551	298 aa		0.19	□□□□□ -2.38
snR60	snR60	SER33	P40510	469 aa		0.19	□□□□□ -2.38
snR60	snR60	AIM36	Q03798	255 aa		0.19	□□□□□ -2.38
snR60	snR60	ASR1	Q06834	288 aa		0.19	□□□□□ -2.38
snR60	snR60	USB1	Q12208	290 aa	Known RBP	0.19	□□□□□ -2.38
snR60	snR60	SIA1	Q12212	622 aa		0.19	□□□□□ -2.38
snR60	snR60	PSY3	Q12318	242 aa		0.19	□□□□□ -2.38
snR60	snR60	AI5_BETA	Q9ZZX0	354 aa		0.19	□□□□□ -2.38
snR60	snR60	GPA2	P10823	449 aa		0.18	□□□□□ -2.38
snR60	snR60	OAC1	P32332	324 aa		0.18	□□□□□ -2.38
snR60	snR60	EBP2	P36049	427 aa	Known RBP	0.18	□□□□□ -2.38
snR60	snR60	RCN1	P36054	211 aa		0.18	□□□□□ -2.38
snR60	snR60	PRS4	P38063	326 aa	Predicted RBP	0.18	□□□□□ -2.38
snR60	snR60	ERV15	P38312	142 aa		0.18	□□□□□ -2.38
snR60	snR60	SVP26	P38869	228 aa		0.18	□□□□□ -2.38
snR60	snR60	ARC15	P40518	154 aa	RIP-Chip data	0.18	□□□□□ -2.38	not detected
snR60	snR60	MPA43	P53583	542 aa	Predicted RBP	0.18	□□□□□ -2.38
snR60	snR60	YNR062C	P53748	327 aa		0.18	□□□□□ -2.38
snR60	snR60	CTF19	Q02732	369 aa		0.18	□□□□□ -2.38
snR60	snR60	SEC10	Q06245	871 aa		0.18	□□□□□ -2.38
snR60	snR60	YHR032W-A	P0C5N6	59 aa		0.17	□□□□□ -2.38
snR60	snR60	RPL4A	P10664	362 aa	Known RBP	0.17	□□□□□ -2.38
snR60	snR60	CWP1	P28319	239 aa		0.17	□□□□□ -2.38
snR60	snR60	COS8	P38723	381 aa		0.17	□□□□□ -2.38
snR60	snR60	AIM20	P40451	204 aa		0.17	□□□□□ -2.38
snR60	snR60	NAS2	P40555	220 aa		0.17	□□□□□ -2.38
snR60	snR60	RPL4B	P49626	362 aa	Known RBP	0.17	□□□□□ -2.38
snR60	snR60	YGR026W	P53217	278 aa		0.17	□□□□□ -2.38
snR60	snR60	SLX9	P53251	210 aa	Predicted RBP	0.17	□□□□□ -2.38
snR60	snR60	YGR219W	P53307	113 aa		0.17	□□□□□ -2.38
snR60	snR60	YMR279C	Q03263	540 aa		0.17	□□□□□ -2.38
snR60	snR60	VPS20	Q04272	221 aa		0.17	□□□□□ -2.38
snR60	snR60	YMR111C	Q04461	462 aa	Predicted RBP	0.17	□□□□□ -2.38
snR60	snR60	SML1	Q04964	104 aa		0.17	□□□□□ -2.38
snR60	snR60	YOS9	Q99220	542 aa		0.17	□□□□□ -2.38
snR60	snR60	COX5A	P00424	153 aa		0.16	□□□□□ -2.38
snR60	snR60	YHL049C	P38722	271 aa		0.16	□□□□□ -2.38
snR60	snR60	YIA6	P40556	373 aa		0.16	□□□□□ -2.38
snR60	snR60	NBP35	P52920	328 aa		0.16	□□□□□ -2.38
snR60	snR60	SLD7	Q08457	257 aa		0.16	□□□□□ -2.38
snR60	snR60	NFI1	Q12216	726 aa		0.16	□□□□□ -2.38
snR60	snR60	YPL119C-A	Q3E751	87 aa		0.16	□□□□□ -2.38
snR60	snR60	CDC37	P06101	506 aa	Known RBP	0.15	□□□□□ -2.39
snR60	snR60	UGA1	P17649	471 aa		0.15	□□□□□ -2.39
snR60	snR60	YHR125W	P38831	101 aa		0.15	□□□□□ -2.39
snR60	snR60	ICE2	P40499	491 aa		0.15	□□□□□ -2.39
snR60	snR60	AGE2	P40529	298 aa		0.15	□□□□□ -2.39
snR60	snR60	AGP3	P43548	558 aa		0.15	□□□□□ -2.39
snR60	snR60	LOH1	P47055	219 aa		0.15	□□□□□ -2.39
snR60	snR60	SWS2	P53937	143 aa		0.15	□□□□□ -2.39
snR60	snR60	ARP5	P53946	755 aa		0.15	□□□□□ -2.39
snR60	snR60	UBC7	Q02159	165 aa		0.15	□□□□□ -2.39
snR60	snR60	CAR2	P07991	424 aa	Known RBP	0.14	□□□□□ -2.39
snR60	snR60	PET18	P25362	215 aa		0.14	□□□□□ -2.39
snR60	snR60	PEX18	P38855	283 aa		0.14	□□□□□ -2.39
snR60	snR60	RIB4	P50861	169 aa	Predicted RBP	0.14	□□□□□ -2.39
snR60	snR60	PEX31	P53203	462 aa		0.14	□□□□□ -2.39
snR60	snR60	NEJ1	Q06148	342 aa		0.14	□□□□□ -2.39
snR60	snR60	FLO9	P39712	1322 aa		0.13	□□□□□ -2.39
snR60	snR60	RPP0	P05317	312 aa	Known RBP	0.13	□□□□□ -2.39
snR60	snR60	SEC22	P22214	214 aa		0.13	□□□□□ -2.39
snR60	snR60	SSH1	P38353	490 aa	Known RBP	0.13	□□□□□ -2.39
snR60	snR60	YEL067C	P39978	195 aa		0.13	□□□□□ -2.39
snR60	snR60	YER076C	P40049	302 aa		0.13	□□□□□ -2.39
snR60	snR60	YIL001W	P40560	513 aa		0.13	□□□□□ -2.39
snR60	snR60	YGL185C	P53100	379 aa		0.13	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 569.8 ms