RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C RFC4P40339 323 aaKnown RBP2.58□□□□□ -2
VPS9YML097C SNZ3P43545 298 aa2.58□□□□□ -2
VPS9YML097C SDT1P53078 280 aa2.58□□□□□ -2
VPS9YML097C SNZ2P53824 298 aa2.58□□□□□ -2
VPS9YML097C HAL1Q01766 294 aa2.58□□□□□ -2
VPS9YML097C ATG17Q06410 417 aa2.58□□□□□ -2
VPS9YML097C YPR147CQ06522 304 aaKnown RBP2.58□□□□□ -2
VPS9YML097C GET4Q12125 312 aa2.58□□□□□ -2
VPS9YML097C YLR126CQ12288 251 aa2.58□□□□□ -2
VPS9YML097C YKL183C-AQ3E765 70 aa2.58□□□□□ -2
VPS9YML097C YAL063C-AQ3E791 96 aa2.58□□□□□ -2
VPS9YML097C SEY1Q99287 776 aa2.58□□□□□ -2
VPS9YML097C PSK1P31374 1356 aa2.57□□□□□ -2
VPS9YML097C RPL28P02406 149 aaKnown RBP2.57□□□□□ -2
VPS9YML097C YBR121C-AP0C5L4 52 aa2.57□□□□□ -2
VPS9YML097C OSM1P21375 501 aaKnown RBP2.57□□□□□ -2
VPS9YML097C CDC10P25342 322 aaKnown RBP2.57□□□□□ -2
VPS9YML097C UTH1P36135 365 aa2.57□□□□□ -2
VPS9YML097C YHR127WP38833 243 aaKnown RBP2.57□□□□□ -2
VPS9YML097C RRG9P40156 214 aa2.57□□□□□ -2
VPS9YML097C YIL054WP40524 105 aa2.57□□□□□ -2
VPS9YML097C CWC23P52868 283 aaPredicted RBP2.57□□□□□ -2
VPS9YML097C CAX4P53223 239 aa2.57□□□□□ -2
VPS9YML097C SWT21P53873 357 aaPredicted RBP2.57□□□□□ -2
VPS9YML097C SDC1Q03323 175 aa2.57□□□□□ -2
VPS9YML097C DIB1Q06819 143 aaPredicted RBP2.57□□□□□ -2
VPS9YML097C RFM1Q12192 310 aa2.57□□□□□ -2
VPS9YML097C RAD9P14737 1309 aa2.56□□□□□ -2
VPS9YML097C EHD3P28817 500 aa2.56□□□□□ -2
VPS9YML097C IDH1P28834 360 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
VPS9YML097C DBP7P36120 742 aaKnown RBP2.56□□□□□ -2
VPS9YML097C MRPL39P36533 70 aa2.56□□□□□ -2
VPS9YML097C GOS1P38736 223 aa2.56□□□□□ -2
VPS9YML097C YRB1P41920 201 aaKnown RBP2.56□□□□□ -2
VPS9YML097C CUS2P53830 285 aaPredicted RBP2.56□□□□□ -2
VPS9YML097C YMR226CQ05016 267 aaKnown RBP2.56□□□□□ -2
VPS9YML097C CDC123Q05791 360 aa2.56□□□□□ -2
VPS9YML097C RRP40Q08285 240 aaKnown RBP2.56□□□□□ -2
VPS9YML097C TIR4Q12218 487 aaPredicted RBP2.56□□□□□ -2
VPS9YML097C DFM1Q12743 341 aaKnown RBP2.56□□□□□ -2
VPS9YML097C YKR104WP0CE69 306 aa2.55□□□□□ -2
VPS9YML097C APA2P22108 325 aa2.55□□□□□ -2
VPS9YML097C YBL081WP38180 368 aaKnown RBP2.55□□□□□ -2
VPS9YML097C URA8P38627 578 aaPredicted RBP2.55□□□□□ -2
VPS9YML097C AVT6P40074 448 aa2.55□□□□□ -2
VPS9YML097C RPE1P46969 238 aa2.55□□□□□ -2
VPS9YML097C TRM9P49957 279 aa2.55□□□□□ -2
VPS9YML097C LIF1P53150 421 aa2.55□□□□□ -2
VPS9YML097C ALG13P53178 202 aa2.55□□□□□ -2
VPS9YML097C SLX9P53251 210 aaPredicted RBP2.55□□□□□ -2
VPS9YML097C SPG4Q04438 115 aa2.55□□□□□ -2
VPS9YML097C ECM19Q06011 112 aa2.55□□□□□ -2
VPS9YML097C HEM25Q07534 307 aa2.55□□□□□ -2
VPS9YML097C COQ10Q08058 207 aa2.55□□□□□ -2
VPS9YML097C YPL150WQ12152 901 aa2.55□□□□□ -2
VPS9YML097C YDR157WA0A023PZE8 133 aa2.54□□□□□ -2
VPS9YML097C HTB1P02293 131 aaKnown RBP2.54□□□□□ -2
VPS9YML097C HTB2P02294 131 aa2.54□□□□□ -2
VPS9YML097C YPK2P18961 677 aa2.54□□□□□ -2
VPS9YML097C ERG2P32352 222 aa2.54□□□□□ -2
VPS9YML097C ASP1P38986 381 aaPredicted RBP2.54□□□□□ -2
VPS9YML097C MIC19P43594 170 aa2.54□□□□□ -2
VPS9YML097C ADO1P47143 340 aaKnown RBP2.54□□□□□ -2
VPS9YML097C NSA1P53136 463 aaPredicted RBP2.54□□□□□ -2
VPS9YML097C NNT1Q05874 261 aa2.54□□□□□ -2
VPS9YML097C DXO1Q06349 442 aa2.54□□□□□ -2
VPS9YML097C ADH1P00330 348 aaKnown RBP2.53□□□□□ -2
VPS9YML097C PHO80P20052 293 aa2.53□□□□□ -2
VPS9YML097C COX10P21592 462 aa2.53□□□□□ -2
VPS9YML097C PPH21P23594 369 aa2.53□□□□□ -2
VPS9YML097C RPB9P27999 122 aa2.53□□□□□ -2
VPS9YML097C VPH2P32341 215 aa2.53□□□□□ -2
VPS9YML097C ASF2P32448 525 aaPredicted RBP2.53□□□□□ -2
VPS9YML097C SSO1P32867 290 aa2.53□□□□□ -2
VPS9YML097C GDH2P33327 1092 aaKnown RBP2.53□□□□□ -2
VPS9YML097C HMT1P38074 348 aa2.53□□□□□ -2
VPS9YML097C ARN2P38724 620 aa2.53□□□□□ -2
VPS9YML097C FRT2P39734 528 aa2.53□□□□□ -2
VPS9YML097C YMR144WP40214 342 aaKnown RBP2.53□□□□□ -2
VPS9YML097C PRE5P40302 234 aaKnown RBP2.53□□□□□ -2
VPS9YML097C YRB2P40517 327 aa2.53□□□□□ -2
VPS9YML097C HAM1P47119 197 aaKnown RBP2.53□□□□□ -2
VPS9YML097C YGR018CP53211 109 aa2.53□□□□□ -2
VPS9YML097C YMR166CQ03829 368 aa2.53□□□□□ -2
VPS9YML097C YDL144CQ07589 356 aa2.53□□□□□ -2
VPS9YML097C CLP1Q08685 445 aaPredicted RBP2.53□□□□□ -2
VPS9YML097C YDL211CQ12121 372 aa2.53□□□□□ -2
VPS9YML097C JLP1Q12358 412 aa2.53□□□□□ -2
VPS9YML097C NCB2Q92317 146 aa2.53□□□□□ -2
VPS9YML097C AUS1Q08409 1394 aa2.53□□□□□ -2
VPS9YML097C RPS19AP07280 144 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C RPS19BP07281 144 aaPredicted RBP2.52□□□□□ -2.01
VPS9YML097C RPL27AP0C2H6 136 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C RPL27BP0C2H7 136 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C HSP26P15992 214 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
VPS9YML097C NTF2P33331 125 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C BDH1P39714 382 aa2.52□□□□□ -2.01
VPS9YML097C PRE6P40303 254 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C NIF3P53081 288 aa2.52□□□□□ -2.01
VPS9YML097C YLR152CP54072 576 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms