RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C ARO9P38840 513 aaPredicted RBP2.87□□□□□ -1.95
RPN1YHR027C FAA3P39002 694 aa2.87□□□□□ -1.95
RPN1YHR027C YCK3P39962 524 aa2.87□□□□□ -1.95
RPN1YHR027C SNU13P39990 126 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C AIM25P47140 327 aa2.87□□□□□ -1.95
RPN1YHR027C MTR3P48240 250 aaPredicted RBP2.87□□□□□ -1.95
RPN1YHR027C YNR021WP53723 404 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C FRE4P53746 719 aa2.87□□□□□ -1.95
RPN1YHR027C YNL018CP53976 612 aa2.87□□□□□ -1.95
RPN1YHR027C RSM23Q01163 450 aa2.87□□□□□ -1.95
RPN1YHR027C PKR1Q03880 122 aaKnown RBP2.87□□□□□ -1.95
RPN1YHR027C GTO3Q04806 366 aa2.87□□□□□ -1.95
RPN1YHR027C ROY1Q04847 553 aa2.87□□□□□ -1.95
RPN1YHR027C DAL4Q04895 635 aa2.87□□□□□ -1.95
RPN1YHR027C AAD4Q07747 329 aa2.87□□□□□ -1.95
RPN1YHR027C YLR030WQ07967 263 aa2.87□□□□□ -1.95
RPN1YHR027C BSC1Q12140 328 aa2.87□□□□□ -1.95
RPN1YHR027C YIR021W-AQ3E739 70 aa2.87□□□□□ -1.95
RPN1YHR027C YLR361C-AQ3E795 98 aa2.87□□□□□ -1.95
RPN1YHR027C ILV1P00927 576 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TY2A-FP0CX61 438 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-GR2P0CX62 438 aa2.86□□□□□ -1.95
RPN1YHR027C RPL35AP0CX84 120 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C RPL35BP0CX85 120 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TIR1P10863 254 aa2.86□□□□□ -1.95
RPN1YHR027C TFS1P14306 219 aa2.86□□□□□ -1.95
RPN1YHR027C MEK1P24719 497 aaPredicted RBP2.86□□□□□ -1.95
RPN1YHR027C POP5P28005 173 aa2.86□□□□□ -1.95
RPN1YHR027C PRE4P30657 266 aa2.86□□□□□ -1.95
RPN1YHR027C GLC7P32598 312 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C EMC3P36039 253 aa2.86□□□□□ -1.95
RPN1YHR027C YBR063CP38083 404 aa2.86□□□□□ -1.95
RPN1YHR027C VPS73P53142 486 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C YGR250CP53316 781 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C BOR1P53838 576 aa2.86□□□□□ -1.95
RPN1YHR027C YIF1P53845 314 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C CTF19Q02732 369 aa2.86□□□□□ -1.95
RPN1YHR027C ARG7Q04728 441 aa2.86□□□□□ -1.95
RPN1YHR027C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
RPN1YHR027C RPL13AQ12690 199 aaPredicted RBP2.86□□□□□ -1.95
RPN1YHR027C YJR112W-AQ3E743 109 aa2.86□□□□□ -1.95
RPN1YHR027C MBF1O14467 151 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TDH2P00358 332 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TDH3P00359 332 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
RPN1YHR027C RPS31P05759 152 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TY2A-LR1P0C2J4 438 aa2.86□□□□□ -1.95
RPN1YHR027C UBI4P0CG63 381 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C RPL40AP0CH08 128 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C RPL40BP0CH09 128 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C HAP4P14064 554 aa2.86□□□□□ -1.95
RPN1YHR027C ADH7P25377 361 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-CP25383 438 aa2.86□□□□□ -1.95
RPN1YHR027C PBN1P25580 416 aa2.86□□□□□ -1.95
RPN1YHR027C ERG3P32353 365 aa2.86□□□□□ -1.95
RPN1YHR027C SRB5P32585 307 aa2.86□□□□□ -1.95
RPN1YHR027C UTR2P32623 467 aa2.86□□□□□ -1.95
RPN1YHR027C MCH2P36032 473 aa2.86□□□□□ -1.95
RPN1YHR027C NTC20P38302 140 aaPredicted RBP2.86□□□□□ -1.95
RPN1YHR027C PTH1P38876 190 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C OSW5P40219 148 aa2.86□□□□□ -1.95
RPN1YHR027C SEC24P40482 926 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C FET4P40988 552 aa2.86□□□□□ -1.95
RPN1YHR027C BNS1P50084 137 aa2.86□□□□□ -1.95
RPN1YHR027C YIP4P53093 235 aa2.86□□□□□ -1.95
RPN1YHR027C FPK1P53739 893 aa2.86□□□□□ -1.95
RPN1YHR027C DYN2Q02647 92 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-DR2Q03483 438 aa2.86□□□□□ -1.95
RPN1YHR027C GOT1Q03554 138 aa2.86□□□□□ -1.95
RPN1YHR027C YDR132CQ03900 495 aa2.86□□□□□ -1.95
RPN1YHR027C TMN2Q04562 672 aa2.86□□□□□ -1.95
RPN1YHR027C CDD1Q06549 142 aa2.86□□□□□ -1.95
RPN1YHR027C RDR1Q08904 546 aa2.86□□□□□ -1.95
RPN1YHR027C FSF1Q12029 327 aaKnown RBP2.86□□□□□ -1.95
RPN1YHR027C TIR4Q12218 487 aaPredicted RBP2.86□□□□□ -1.95
RPN1YHR027C TY2A-BQ12260 438 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-OR2Q12293 438 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-DR1Q12392 438 aa2.86□□□□□ -1.95
RPN1YHR027C ISA2Q12425 185 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-OR1Q12439 438 aa2.86□□□□□ -1.95
RPN1YHR027C YLR099W-AQ3E798 87 aa2.86□□□□□ -1.95
RPN1YHR027C TY2A-DR3Q99303 438 aa2.86□□□□□ -1.95
RPN1YHR027C HTA2P04912 132 aa2.85□□□□□ -1.95
RPN1YHR027C RER1P25560 188 aa2.85□□□□□ -1.95
RPN1YHR027C YCL068CP25593 260 aa2.85□□□□□ -1.95
RPN1YHR027C GEX1P25596 615 aa2.85□□□□□ -1.95
RPN1YHR027C YSC83P32792 385 aa2.85□□□□□ -1.95
RPN1YHR027C SCD5P34758 872 aa2.85□□□□□ -1.95
RPN1YHR027C SHE2P36068 246 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
RPN1YHR027C PHD1P36093 366 aa2.85□□□□□ -1.95
RPN1YHR027C YEL057CP39983 233 aa2.85□□□□□ -1.95
RPN1YHR027C YIR007WP40566 764 aa2.85□□□□□ -1.95
RPN1YHR027C PFS2P42841 465 aaKnown RBP2.85□□□□□ -1.95
RPN1YHR027C PAM16P42949 149 aa2.85□□□□□ -1.95
RPN1YHR027C YGR149WP48236 432 aa2.85□□□□□ -1.95
RPN1YHR027C APJ1P53940 528 aa2.85□□□□□ -1.95
RPN1YHR027C ELC1Q03071 99 aa2.85□□□□□ -1.95
RPN1YHR027C PEX29Q03370 554 aa2.85□□□□□ -1.95
RPN1YHR027C ECM18Q04623 453 aa2.85□□□□□ -1.95
RPN1YHR027C SCW10Q04951 389 aa2.85□□□□□ -1.95
RPN1YHR027C NUT2Q06213 157 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms