RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C MOG1P47123 218 aa5.6□□□□□ -1.51
SHO1YER118C TOS8P53147 276 aa5.6□□□□□ -1.51
SHO1YER118C SYF2P53277 215 aaPredicted RBP5.6□□□□□ -1.51
SHO1YER118C YMR010WQ03687 405 aa5.6□□□□□ -1.51
SHO1YER118C YDR248CQ03786 193 aa5.6□□□□□ -1.51
SHO1YER118C YPR091CQ06833 770 aa5.6□□□□□ -1.51
SHO1YER118C HTZ1Q12692 134 aaKnown RBP5.6□□□□□ -1.51
SHO1YER118C ECM5Q03214 1411 aa5.59□□□□□ -1.51
SHO1YER118C MGT1P26188 188 aa5.59□□□□□ -1.51
SHO1YER118C FUN26P31381 517 aa5.59□□□□□ -1.51
SHO1YER118C CLG1P35190 452 aa5.59□□□□□ -1.51
SHO1YER118C SRY1P36007 326 aa5.59□□□□□ -1.51
SHO1YER118C MRP21P38175 177 aa5.59□□□□□ -1.51
SHO1YER118C YBR062CP38239 180 aa5.59□□□□□ -1.51
SHO1YER118C CYC2P38909 366 aa5.59□□□□□ -1.51
SHO1YER118C YJR054WP47114 497 aa5.59□□□□□ -1.51
SHO1YER118C VMA10P48836 114 aaKnown RBP5.59□□□□□ -1.51
SHO1YER118C CWC25P53854 179 aaKnown RBP5.59□□□□□ -1.51
SHO1YER118C TPS1Q00764 495 aaKnown RBP5.59□□□□□ -1.51
SHO1YER118C TDA1Q03533 586 aa5.59□□□□□ -1.51
SHO1YER118C SPG4Q04438 115 aa5.59□□□□□ -1.51
SHO1YER118C SPC24Q04477 213 aa5.59□□□□□ -1.51
SHO1YER118C LOA1Q06508 300 aa5.59□□□□□ -1.51
SHO1YER118C YOR283WQ12040 230 aaKnown RBP5.59□□□□□ -1.51
SHO1YER118C FCY22Q12119 530 aa5.59□□□□□ -1.51
SHO1YER118C YKR104WP0CE69 306 aa5.58□□□□□ -1.52
SHO1YER118C CUP2P15315 225 aa5.58□□□□□ -1.52
SHO1YER118C MRPL20P22354 195 aaPredicted RBP5.58□□□□□ -1.52
SHO1YER118C TAH1P25638 111 aaPredicted RBP5.58□□□□□ -1.52
SHO1YER118C UBC8P28263 218 aa5.58□□□□□ -1.52
SHO1YER118C YKR041WP36134 250 aa5.58□□□□□ -1.52
SHO1YER118C MIX23P38162 196 aa5.58□□□□□ -1.52
SHO1YER118C ECM33P38248 429 aaKnown RBP5.58□□□□□ -1.52
SHO1YER118C PEX22P39718 180 aa5.58□□□□□ -1.52
SHO1YER118C MOB2P43563 287 aa5.58□□□□□ -1.52
SHO1YER118C MDV1P47025 714 aa5.58□□□□□ -1.52
SHO1YER118C IDP3P53982 420 aaKnown RBP5.58□□□□□ -1.52
SHO1YER118C UTP15Q04305 513 aaKnown RBP5.58□□□□□ -1.52
SHO1YER118C FAR10Q06001 478 aa5.58□□□□□ -1.52
SHO1YER118C YPR127WQ06494 345 aa5.58□□□□□ -1.52
SHO1YER118C ERV2Q12284 196 aa5.58□□□□□ -1.52
SHO1YER118C COX5AP00424 153 aa5.57□□□□□ -1.52
SHO1YER118C RPS14AP06367 137 aaKnown RBP5.57□□□□□ -1.52
SHO1YER118C PET54P10834 293 aa5.57□□□□□ -1.52
SHO1YER118C GRX2P17695 143 aaKnown RBP5.57□□□□□ -1.52
SHO1YER118C CAT2P32796 670 aaKnown RBP5.57□□□□□ -1.52
SHO1YER118C TIP20P33891 701 aa5.57□□□□□ -1.52
SHO1YER118C HEK2P38199 381 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52 RIP-Chip
SHO1YER118C RPS14BP39516 138 aaKnown RBP5.57□□□□□ -1.52
SHO1YER118C PAN6P40459 309 aa5.57□□□□□ -1.52
SHO1YER118C COS6P53344 381 aa5.57□□□□□ -1.52
SHO1YER118C ARO80Q04052 950 aa5.57□□□□□ -1.52
SHO1YER118C YLR036CQ07986 203 aa5.57□□□□□ -1.52
SHO1YER118C DNA2P38859 1522 aa5.57□□□□□ -1.52
SHO1YER118C CDC28P00546 298 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C RPS18AP0CX55 146 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C RPS18BP0CX56 146 aaPredicted RBP5.56□□□□□ -1.52
SHO1YER118C RPL4AP10664 362 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C GCN3P14741 305 aa5.56□□□□□ -1.52
SHO1YER118C MIR1P23641 311 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C UPS2P35200 230 aa5.56□□□□□ -1.52
SHO1YER118C CHL4P38907 458 aa5.56□□□□□ -1.52
SHO1YER118C YMR144WP40214 342 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C CIN5P40917 295 aa5.56□□□□□ -1.52
SHO1YER118C CPR7P47103 393 aa5.56□□□□□ -1.52
SHO1YER118C BXI1P48558 297 aa5.56□□□□□ -1.52
SHO1YER118C RPL4BP49626 362 aaKnown RBP5.56□□□□□ -1.52
SHO1YER118C TPC1P53257 314 aa5.56□□□□□ -1.52
SHO1YER118C NRM1P53718 249 aa5.56□□□□□ -1.52
SHO1YER118C SFM1Q12314 213 aa5.56□□□□□ -1.52
SHO1YER118C RDI1Q12434 202 aa5.56□□□□□ -1.52
SHO1YER118C RPL42AP0CX27 106 aaKnown RBP5.55□□□□□ -1.52
SHO1YER118C RPL42BP0CX28 106 aaKnown RBP5.55□□□□□ -1.52
SHO1YER118C HEM14P40012 539 aa5.55□□□□□ -1.52
SHO1YER118C MAM33P40513 266 aa5.55□□□□□ -1.52
SHO1YER118C CFD1P40558 293 aa5.55□□□□□ -1.52
SHO1YER118C COS4P43542 379 aa5.55□□□□□ -1.52
SHO1YER118C COG5P53951 403 aa5.55□□□□□ -1.52
SHO1YER118C RSC9Q03124 581 aa5.55□□□□□ -1.52
SHO1YER118C YDR415CQ04033 374 aaPredicted RBP5.55□□□□□ -1.52
SHO1YER118C RRP40Q08285 240 aaKnown RBP5.55□□□□□ -1.52
SHO1YER118C HRT3Q12347 344 aa5.55□□□□□ -1.52
SHO1YER118C MHP1P43638 1398 aa5.55□□□□□ -1.52
SHO1YER118C ATG15P25641 520 aa5.54□□□□□ -1.52
SHO1YER118C SEC1P30619 724 aaKnown RBP5.54□□□□□ -1.52
SHO1YER118C GPX1P36014 167 aa5.54□□□□□ -1.52
SHO1YER118C SCO2P38072 301 aa5.54□□□□□ -1.52
SHO1YER118C BDH1P39714 382 aa5.54□□□□□ -1.52
SHO1YER118C SUN4P53616 420 aa5.54□□□□□ -1.52
SHO1YER118C SDC1Q03323 175 aa5.54□□□□□ -1.52
SHO1YER118C GAS2Q06135 555 aa5.54□□□□□ -1.52
SHO1YER118C YOL024WQ08172 172 aa5.54□□□□□ -1.52
SHO1YER118C YPL245WQ12179 454 aaKnown RBP5.54□□□□□ -1.52
SHO1YER118C KOG1P38873 1557 aa5.54□□□□□ -1.52
SHO1YER118C REV3P14284 1504 aa5.53□□□□□ -1.52
SHO1YER118C MRS1P07266 363 aa5.53□□□□□ -1.52
SHO1YER118C TRX3P25372 127 aa5.53□□□□□ -1.52
SHO1YER118C OAC1P32332 324 aa5.53□□□□□ -1.52
SHO1YER118C MRPL39P36533 70 aa5.53□□□□□ -1.52
SHO1YER118C MBA1P38300 278 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms