RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	ORM2	Q06144	216 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	PHO92	Q06390	306 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	HEM25	Q07534	307 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	YPL199C	Q08954	240 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	INP53	Q12271	1107 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	ISA2	Q12425	185 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	IZH2	Q12442	317 aa		6.35	□□□□□ -1.39
SKP1	YDR328C	MES1	P00958	751 aa	Known RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	HEM4	P06174	275 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	CUP1-1	P0CX80	61 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	CUP1-2	P0CX81	61 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	NAM2	P11325	894 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	PDA1	P16387	420 aa	Known RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	KRE6	P32486	720 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	SNC2	P33328	115 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	CLG1	P35190	452 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	SSH1	P38353	490 aa	Known RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	AIM20	P40451	204 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	GPP1	P41277	250 aa	Known RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	CTK2	P46962	323 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	UBX6	P47049	396 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	ELA1	P53861	379 aa	Predicted RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	RSM23	Q01163	450 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	RCE1	Q03530	315 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	KEI1	Q06346	221 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	THI72	Q08579	599 aa		6.34	□□□□□ -1.39
SKP1	YDR328C	FOL3	Q12676	427 aa	Predicted RBP	6.34	□□□□□ -1.39
SKP1	YDR328C	FUR4	P05316	633 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	MCM1	P11746	286 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	PET18	P25362	215 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	MRPS5	P33759	307 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	GPI16	P38875	610 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	SEN34	P39707	275 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	HPA3	P39979	161 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	YER084W	P40057	128 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	QDR1	P40475	563 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	SYS1	P41544	203 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	IDP2	P41939	412 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	CIN2	P46670	268 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	PHB2	P50085	310 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	ACS2	P52910	683 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	SCW4	P53334	386 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	ALG12	P53730	551 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	LSM7	P53905	115 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	NRK1	P53915	240 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	RPL6A	Q02326	176 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	DIG2	Q03373	323 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	API2	Q04413	109 aa		6.33	□□□□□ -1.4
SKP1	YDR328C	PRS5	Q12265	496 aa	Known RBP	6.33	□□□□□ -1.4
SKP1	YDR328C	SGA1	P08019	549 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	PET54	P10834	293 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	RIB7	P33312	244 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	YIL060W	P40519	144 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	YKE4	P40544	346 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	FMP48	P53233	369 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	VHT1	P53241	593 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	BUD25	P85052	153 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	YDR391C	Q04170	232 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	COX17	Q12287	69 aa		6.32	□□□□□ -1.4
SKP1	YDR328C	TRA1	P38811	3744 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6.31	□□□□□ -1.4	not detected
SKP1	YDR328C	GPM1	P00950	247 aa	Known RBP	6.31	□□□□□ -1.4
SKP1	YDR328C	CHO1	P08456	276 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	MAK32	P23060	363 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	AFG1	P32317	509 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	DBF20	P32328	564 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	HYM1	P32464	399 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	PPZ2	P33329	710 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	SEC66	P33754	206 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	SOL3	P38858	249 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	MOB2	P43563	287 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	MSE1	P48525	536 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	YGL159W	P53110	370 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	RNH201	P53942	307 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	CTF19	Q02732	369 aa		6.31	□□□□□ -1.4
SKP1	YDR328C	PRP8	P33334	2413 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	DSF1	P0CX08	502 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	YNR073C	P0CX09	502 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	RPL30	P14120	105 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	RPI1	P23250	407 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	MRT4	P33201	236 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	APL3	P38065	1025 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	UMP1	P38293	148 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	YHL037C	P38733	133 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	YHR122W	P38829	231 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	ATF1	P40353	525 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	CAT5	P41735	233 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	YJL016W	P47072	561 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	GPI14	P47088	403 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	SIP18	P50263	79 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	YNR048W	P53740	393 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	HAS1	Q03532	505 aa	Known RBP	6.3	□□□□□ -1.4
SKP1	YDR328C	CRR1	Q05790	422 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	FIT3	Q08907	204 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	ENV7	Q12003	364 aa		6.3	□□□□□ -1.4
SKP1	YDR328C	RPL3	P14126	387 aa	Known RBP	6.29	□□□□□ -1.4
SKP1	YDR328C	HXT2	P23585	541 aa		6.29	□□□□□ -1.4
SKP1	YDR328C	PUP1	P25043	261 aa		6.29	□□□□□ -1.4
SKP1	YDR328C	ARO4	P32449	370 aa	Known RBP	6.29	□□□□□ -1.4
SKP1	YDR328C	YIP5	P53108	310 aa		6.29	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms