RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FAM189A1O60320 539 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 MRE11P49959 708 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 PLEKHG4Q58EX7 1191 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 UBXN11Q5T124 520 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 CRELD2Q6UXH1 353 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-230ENST00000641927 INTS8Q75QN2 995 aaKnown RBP19.01■□□□□ 0.63
PHGDH-230ENST00000641927 TMEM192Q8IY95 271 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 DBF4BQ8NFT6 615 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 CCDC127Q96BQ5 260 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 CCDC94Q9BW85 323 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-230ENST00000641927 VPS16Q9H269 839 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 NXF3Q9H4D5 531 aaKnown RBP19.01■□□□□ 0.63
PHGDH-230ENST00000641927 HES2Q9Y543 173 aa19.01■□□□□ 0.63
PHGDH-230ENST00000641927 MAPK13O15264 365 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 MGEA5O60502 916 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 CLTAP09496 248 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 ITGB8P26012 769 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 MARSP56192 900 aaKnown RBP19■□□□□ 0.63
PHGDH-230ENST00000641927 CYP24A1Q07973 514 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 KYAT1Q16773 422 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 ACAP3Q96P50 834 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 FTHL17Q9BXU8 183 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 RPF1Q9H9Y2 349 aaKnown RBP19■□□□□ 0.63
PHGDH-230ENST00000641927 FAM105AQ9NUU6 356 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 PCDH10Q9P2E7 1040 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 LIMA1Q9UHB6 759 aaKnown RBP19■□□□□ 0.63
PHGDH-230ENST00000641927 CPSF3Q9UKF6 684 aaKnown RBP19■□□□□ 0.63
PHGDH-230ENST00000641927 PCDHB2Q9Y5E7 798 aa19■□□□□ 0.63
PHGDH-230ENST00000641927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19■□□□□ 0.63
PHGDH-230ENST00000641927 EVI5O60447 810 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 RFC2P35250 354 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 GRM5P41594 1212 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 VAMP7P51809 220 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 BFSP1Q12934 665 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 TRIM59Q8IWR1 403 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 APBB2Q92870 758 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 BORCS6Q96GS4 357 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 TRIM5Q9C035 493 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 MMRN2Q9H8L6 949 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 SNTG2Q9NY99 539 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 IFNKQ9P0W0 207 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 IPPQ9Y573 584 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 SCN5AQ14524 2016 aa18.99■□□□□ 0.63
PHGDH-230ENST00000641927 CXCL10P02778 98 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 CXCL8P10145 99 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 DLATP10515 647 aaKnown RBP18.98■□□□□ 0.63
PHGDH-230ENST00000641927 COPB1P53618 953 aaKnown RBP18.98■□□□□ 0.63
PHGDH-230ENST00000641927 YARSP54577 528 aaKnown RBP18.98■□□□□ 0.63
PHGDH-230ENST00000641927 UBASH3AP57075 661 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 DSC3Q14574 896 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 ENOX2Q16206 610 aaKnown RBP18.98■□□□□ 0.63
PHGDH-230ENST00000641927 MAN2A1Q16706 1144 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 FILIP1LQ4L180 1135 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 USP37Q86T82 979 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 BRSK2Q8IWQ3 736 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 HACE1Q8IYU2 909 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 RNF169Q8NCN4 708 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 DPF3Q92784 378 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 MFSD14AQ96MC6 490 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 FNBP1Q96RU3 617 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 PDE11AQ9HCR9 933 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 PARP2Q9UGN5 583 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 CSF2RAP15509 400 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 AKAP5P24588 427 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 RAB27AP51159 221 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 DLG4P78352 724 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 MFSD5Q6N075 450 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 SMG8Q8ND04 991 aaKnown RBP18.98■□□□□ 0.63
PHGDH-230ENST00000641927 RGS18Q9NS28 235 aa18.98■□□□□ 0.63
PHGDH-230ENST00000641927 ALPK3Q96L96 1907 aa18.97■□□□□ 0.63
PHGDH-230ENST00000641927 AP5Z1O43299 807 aa18.97■□□□□ 0.63
PHGDH-230ENST00000641927 PSMD6Q15008 389 aa18.97■□□□□ 0.63
PHGDH-230ENST00000641927 VWA3BQ502W6 1294 aa18.97■□□□□ 0.63
PHGDH-230ENST00000641927 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-230ENST00000641927 POP1Q99575 1024 aaKnown RBP18.97■□□□□ 0.63
PHGDH-230ENST00000641927 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 RECQL4O94761 1208 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 SKIP12755 728 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 ITGA4P13612 1032 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 SYN1P17600 705 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 TNNI1P19237 187 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 PPP2R3AQ06190 1150 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 SARM1Q6SZW1 724 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 SLC24A5Q71RS6 500 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
PHGDH-230ENST00000641927 RTN4RL1Q86UN2 441 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-230ENST00000641927 PLEKHO2Q8TD55 490 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 PARD3BQ8TEW8 1205 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 SLC35C1Q96A29 364 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 TRAIPQ9BWF2 469 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 XPO4Q9C0E2 1151 aaKnown RBP18.96■□□□□ 0.63
PHGDH-230ENST00000641927 RNF39Q9H2S5 420 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 NDST4Q9H3R1 872 aa18.96■□□□□ 0.63
PHGDH-230ENST00000641927 TOPORSQ9NS56 1045 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-230ENST00000641927 A0A0U1RQF3 1178 aa18.95■□□□□ 0.62
PHGDH-230ENST00000641927 LRRIQ3A6PVS8 624 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-230ENST00000641927 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms