RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	DBNL	Q9UJU6	430 aa	Known RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	AGTPBP1	Q9UPW5	1226 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	AFG3L2	Q9Y4W6	797 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	CENPF	P49454	3210 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	TRIM75P	A6NK02	468 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	BRINP1	O60477	761 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	IDH1	O75874	414 aa	Known RBP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	PYGM	P11217	842 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	PSMC4	P43686	418 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	TMPRSS15	P98073	1019 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	LSAMP	Q13449	338 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	SLC4A8	Q2Y0W8	1093 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	TMEM177	Q53S58	311 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	NKAPL	Q5M9Q1	402 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	RNF219	Q5W0B1	726 aa	Predicted RBP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	CYP2R1	Q6VVX0	501 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	GADL1	Q6ZQY3	521 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	AACS	Q86V21	672 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	KIF18B	Q86Y91	864 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	RAET1E	Q8TD07	263 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	PANK1	Q8TE04	598 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	GCC1	Q96CN9	775 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	KIF1BP	Q96EK5	621 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	HRASLS5	Q96KN8	279 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	KCNJ15	Q99712	375 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	MTA3	Q9BTC8	594 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	CELF4	Q9BZC1	486 aa	Known RBP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	IFT22	Q9H7X7	185 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	SRRD	Q9UH36	339 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	CPA4	Q9UI42	421 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	ZNF281	Q9Y2X9	895 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	MAST2	Q6P0Q8	1798 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	FLT1	P17948	1338 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	ADGRA2	Q96PE1	1338 aa		7.38	□□□□□ -1.23
CASC19-238	ENST00000641523	CCDC66	A2RUB6	948 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	FAM47E-STBD1	D6RA91	191 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	F2	P00734	622 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	BDNF	P23560	247 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	GRK2	P25098	689 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	GRK3	P35626	688 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	GCLC	P48506	637 aa	Predicted RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	RPL11	P62913	178 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	UBXN2A	P68543	259 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	DSG1	Q02413	1049 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	MOGS	Q13724	837 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	OVCH1	Q7RTY7	1134 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	ASB11	Q8WXH4	323 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	FBXW5	Q969U6	566 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	RELT	Q969Z4	430 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	EAF2	Q96CJ1	260 aa	Predicted RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	JAM3	Q9BX67	310 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CDIP1	Q9H305	208 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CLDND1	Q9NY35	253 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TMOD4	Q9NZQ9	345 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	RCAN3	Q9UKA8	241 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	EXOC6B	Q9Y2D4	811 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	MYPN	Q86TC9	1320 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TNRC18	O15417	2968 aa	Predicted RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	C19orf81	C9J6K1	198 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	NPHS1	O60500	1241 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	IFIT2	P09913	472 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CYP2C8	P10632	490 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CD96	P40200	585 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	IL2	P60568	153 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	BNIP3	Q12983	259 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	MTMR1	Q13613	665 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	SART3	Q15020	963 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	FAM110C	Q1W6H9	321 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	SYCP2L	Q5T4T6	812 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	HLA-DQA1	Q5Y7H0	255 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	MAPKAPK5	Q8IW41	473 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TMEM151A	Q8N4L1	468 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CISD2	Q8N5K1	135 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	COG1	Q8WTW3	980 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TGFBRAP1	Q8WUH2	860 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	FCRL2	Q96LA5	508 aa	Predicted RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TRIM8	Q9BZR9	551 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CABP5	Q9NP86	173 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	PIH1D3	Q9NQM4	214 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	ZBTB40	Q9NUA8	1239 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	THG1L	Q9NWX6	298 aa	Known RBP	7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	CBLC	Q9ULV8	474 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	DOCK1	Q14185	1865 aa		7.37	□□□□□ -1.23
CASC19-238	ENST00000641523	TNPO2	O14787	897 aa	Known RBP	7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	WNT9A	O14904	365 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	ZEB2	O60315	1214 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	PPP1R11	O60927	126 aa	Predicted RBP	7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	ADCYAP1R1	P41586	468 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	MECP2	P51608	486 aa	Known RBP	7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	IRX3	P78415	501 aa	Predicted RBP	7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	PRKCQ	Q04759	706 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	ITK	Q08881	620 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	SPP2	Q13103	211 aa		7.36	□□□□□ -1.23
CASC19-238	ENST00000641523	FAM47C	Q5HY64	1035 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms