RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 INO80BQ9C086 356 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-216ENST00000641375 TOPORSQ9NS56 1045 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-216ENST00000641375 FLRT1Q9NZU1 646 aa17.77■□□□□ 0.43
PHGDH-216ENST00000641375 CDC23Q9UJX2 597 aa17.77■□□□□ 0.43
PHGDH-216ENST00000641375 NAGPAQ9UK23 515 aa17.77■□□□□ 0.43
PHGDH-216ENST00000641375 MGAMO43451 1857 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 FOXN3O00409 490 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 DYNC1LI2O43237 492 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF865P0CJ78 1059 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 CYP2B6P20813 491 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 MCL1Q07820 350 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 KIF22Q14807 665 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 KIAA0753Q2KHM9 967 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 ALKBH5Q6P6C2 394 aaKnown RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PPM1KQ8N3J5 372 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 TAS1R2Q8TE23 839 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PRMT7Q9NVM4 692 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 GJD2Q9UKL4 321 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 OGTO15294 1046 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 CA12O43570 354 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 GJB1P08034 283 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PRPF4BQ13523 1007 aaKnown RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 GRIK4Q16099 956 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 ZACNQ401N2 412 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PRAMEF19Q5SWL8 479 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-216ENST00000641375 NOX5Q96PH1 765 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 AKT3Q9Y243 479 aa17.76■□□□□ 0.43
PHGDH-216ENST00000641375 MYH10P35580 1976 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 LRRN2O75325 713 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 AP3M2P53677 418 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 MBTD1Q05BQ5 628 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 GRM1Q13255 1194 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 MPZL3Q6UWV2 235 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 ENOSF1Q7L5Y1 443 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 TLK2Q86UE8 772 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 IFT122Q9HBG6 1241 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 TMEM51Q9NW97 253 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 Q9Y3F1 56 aa17.75■□□□□ 0.43
PHGDH-216ENST00000641375 TTLL13PA6NNM8 815 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 BTNL10A8MVZ5 291 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 PROZP22891 400 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CYP2C19P33261 490 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 SURF1Q15526 300 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CCL14Q16627 93 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 FAM187BQ17R55 369 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ATF7IP2Q5U623 682 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 BRSK2Q8IWQ3 736 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ZNF516Q92618 1163 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ZBTB10Q96DT7 871 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CGRRF1Q99675 332 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CARD6Q9BX69 1037 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 INTUQ9ULD6 942 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 JRKLQ9Y4A0 524 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 FAM189A1O60320 539 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 C4BPAP04003 597 aaKnown RBP17.74■□□□□ 0.43
PHGDH-216ENST00000641375 HARSP12081 509 aaKnown RBP17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CPT1AP50416 773 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 GCNT1Q02742 428 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 TMEM132AQ24JP5 1023 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 WDR44Q5JSH3 913 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 ZBTB33Q86T24 672 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 HELQQ8TDG4 1101 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 PTPRHQ9HD43 1115 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
PHGDH-216ENST00000641375 CNTNAP2Q9UHC6 1331 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 EFCAB8A8MWE9 144 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 DDX3XO00571 662 aaKnown RBP eCLIP17.73■□□□□ 0.437e-18■■■□□ 16.8
PHGDH-216ENST00000641375 ABLIM1O14639 778 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 ZEB2O60315 1214 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 MOCS3O95396 460 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 F2P00734 622 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 ZBTB41Q5SVQ8 909 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 PAPD7Q5XG87 772 aaKnown RBP17.73■□□□□ 0.43
PHGDH-216ENST00000641375 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 CEP112Q8N8E3 955 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 SLC30A5Q8TAD4 765 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 SHC3Q92529 594 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 SYT11Q9BT88 431 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 C1orf112Q9NSG2 853 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 TNFSF13BQ9Y275 285 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 IGHA2P01877 340 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 NAP1L1P55209 391 aaKnown RBP17.73■□□□□ 0.43
PHGDH-216ENST00000641375 AMPD2Q01433 879 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 BIRC3Q13489 604 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 WHAMMP3Q1A5X7 153 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 MARCH8Q5T0T0 291 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 TDRD10Q5VZ19 366 aaKnown RBP17.73■□□□□ 0.43
PHGDH-216ENST00000641375 TSC1Q92574 1164 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 KREMEN1Q96MU8 473 aa17.73■□□□□ 0.43
PHGDH-216ENST00000641375 SAR1BQ9Y6B6 198 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms