RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ZNF280DQ6N043 979 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 ZNF720Q7Z2F6 126 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 FRMD5Q7Z6J6 570 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 SMYD1Q8NB12 490 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 AENQ8WTP8 325 aaKnown RBP13.27□□□□□ -0.28
SPIN3-236ENST00000640131 FIZ1Q96SL8 496 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 RMDN3Q96TC7 470 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 AGPAT3Q9NRZ7 376 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.28
SPIN3-236ENST00000640131 CEP104O60308 925 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 SESN3P58005 492 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.29
SPIN3-236ENST00000640131 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.29
SPIN3-236ENST00000640131 RMDN2Q96LZ7 410 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 NDNQ99608 321 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 SIX2Q9NPC8 291 aa13.27□□□□□ -0.29
SPIN3-236ENST00000640131 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
SPIN3-236ENST00000640131 SLC16A4O15374 487 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 NR1D1P20393 614 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 FUT4P22083 530 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 CBX3Q13185 183 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 BAATQ14032 418 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ALS2CLQ60I27 953 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 HS2ST1Q7LGA3 356 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 BACH1O14867 736 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 PEX3P56589 373 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ADCY1Q08828 1119 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 MAPK7Q13164 816 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 CACNA2D3Q8IZS8 1091 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 SPATA4Q8NEY3 305 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 P3H4Q92791 437 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 SEC16BQ96JE7 1060 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 DHX15O43143 795 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 TBC1D12O60347 775 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 PFDN1O60925 122 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 LCA5LO95447 670 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 GHRP10912 638 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 PSMC2P35998 433 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 HSD17B4P51659 736 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ARHGEF16Q5VV41 709 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 GLYCTKQ8IVS8 523 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 GBP7Q8N8V2 638 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ATP11CQ8NB49 1132 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 SYT15Q9BQS2 421 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 BRD8Q9H0E9 1235 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 AGO4Q9HCK5 861 aaKnown RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 OLFML3Q9NRN5 406 aa13.26□□□□□ -0.29
SPIN3-236ENST00000640131 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-236ENST00000640131 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 GAP43P17677 238 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 GCLMP48507 274 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 BPIFB4P59827 614 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 BTG3Q14201 252 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 PGM5Q15124 567 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 TBC1D1Q86TI0 1168 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 FGD4Q96M96 766 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 RNF146Q9NTX7 359 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 PAIP2BQ9ULR5 123 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 FRMD4BQ9Y2L6 1034 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ANO9A1A5B4 782 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 WDR46O15213 610 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 CCNE2O96020 404 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ALOX15P16050 662 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 CCND1P24385 295 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 PSMC4P43686 418 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 SNRNP48Q6IEG0 339 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 LMNTD2Q8IXW0 634 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms