RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	FAM187B	Q17R55	369 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	RAD9B	Q6WBX8	426 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	SV2A	Q7L0J3	742 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	SRGAP1	Q7Z6B7	1085 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	LMO3	Q8TAP4	145 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMC2	Q8TDI7	906 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	FNBP1	Q96RU3	617 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	CDT1	Q9H211	546 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	GAN	Q9H2C0	597 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	CEP72	Q9P209	647 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	FHOD1	Q9Y613	1164 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	TRIP12	Q14669	1992 aa	Predicted RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	OGT	O15294	1046 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	ARHGAP6	O43182	974 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	EIF4B	P23588	611 aa	Known RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	MXI1	P50539	228 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	CDC42EP1	Q00587	391 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	ARID5A	Q03989	594 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	ITGA7	Q13683	1181 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PSMD6	Q15008	389 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	MTFR1	Q15390	333 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	KRT39	Q6A163	491 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	TOGARAM2	Q6ZUX3	1019 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	CATSPER4	Q7RTX7	472 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	EHBP1	Q8NDI1	1231 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PRIMPOL	Q96LW4	560 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	DESI2	Q9BSY9	194 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	INTS2	Q9H0H0	1204 aa	Known RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	UNC93B1	Q9H1C4	597 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PDZD7	Q9H5P4	517 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PLCB1	Q9NQ66	1216 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PTPN22	Q9Y2R2	807 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PTPRJ	Q12913	1337 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	THSD7B	Q9C0I4	1608 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091		A0A1B0GUA9	196 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	PLEK	P08567	350 aa	Predicted RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	CTSH	P09668	335 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	DARS	P14868	501 aa	Known RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	HOXA11	P31270	313 aa	Predicted RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	MCCD1	P59942	119 aa	Predicted RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	CETN1	Q12798	172 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	RAPGEF1	Q13905	1077 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	SNX17	Q15036	470 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	ENOX2	Q16206	610 aa	Known RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	PTGIS	Q16647	500 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	SCARA3	Q6AZY7	606 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	PHLDB3	Q6NSJ2	640 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	USP37	Q86T82	979 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	TAS1R2	Q8TE23	839 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	SEMA4D	Q92854	862 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	TRMT13	Q9NUP7	481 aa	Known RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	CPSF3	Q9UKF6	684 aa	Known RBP	11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	PLAGL2	Q9UPG8	496 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	CNTNAP2	Q9UHC6	1331 aa		11.34	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF500	O60304	480 aa	Predicted RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	PNMA6A	P0CW24	399 aa	Predicted RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	EPC2	Q52LR7	807 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	IQCE	Q6IPM2	695 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	TAF2	Q6P1X5	1199 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	PDXDC1	Q6P996	788 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	CYP26C1	Q6V0L0	522 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	TMTC1	Q8IUR5	882 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	NME8	Q8N427	588 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	DNAJC5G	Q8N7S2	189 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	OR5B17	Q8NGF7	314 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	IQCD	Q96DY2	449 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	GLT1D1	Q96MS3	346 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	PI4K2A	Q9BTU6	479 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	NAA15	Q9BXJ9	866 aa	Known RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	TMEM8A	Q9HCN3	771 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	STAG3L1	P0CL83	205 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	FECH	P22830	423 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	CRYBB1	P53674	252 aa	Predicted RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	CLDN10	P78369	228 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	SLC9C1	Q4G0N8	1177 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	SERINC5	Q86VE9	423 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	DEFB118	Q96PH6	123 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	SPAG5	Q96R06	1193 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	CELF4	Q9BZC1	486 aa	Known RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	EDEM3	Q9BZQ6	932 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	APEX2	Q9UBZ4	518 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	DNAJC12	Q9UKB3	198 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	SI	P14410	1827 aa		11.33	□□□□□ -0.6
NECAP1-223	ENST00000640091	P4HA2	O15460	535 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	N4BP1	O75113	896 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	C4BPA	P04003	597 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	CXCL8	P10145	99 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	NCBP1	Q09161	790 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	BIRC3	Q13489	604 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MEA1	Q16626	185 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARHGAP44	Q17R89	818 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	SFMBT2	Q5VUG0	894 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	TDRD10	Q5VZ19	366 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARHGEF19	Q8IW93	802 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	BRSK2	Q8IWQ3	736 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms