RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TBC1D23Q9NUY8 699 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SCAF11Q99590 1463 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PHLPP2Q6ZVD8 1323 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EIF3HO15372 352 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HMGN1P05114 100 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SMAD4Q13485 552 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 KPNB1Q14974 876 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 MOGQ16653 247 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SYDE2Q5VT97 1194 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 IL23RQ5VWK5 629 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TMC7Q7Z402 723 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CD302Q8IX05 232 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TTC13Q8NBP0 860 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC43Q96MW1 224 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CARD14Q9BXL6 1004 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 IMPG2Q9BZV3 1241 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CACNA1FO60840 1977 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ST8SIA5O15466 376 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 BUB1O43683 1085 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 RASSF9O75901 435 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 KCNH1O95259 989 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CD2BP2O95400 341 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PDHBP11177 359 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CDK4P11802 303 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ATP5F1P24539 256 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 MAPK3P27361 379 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SERPINB3P29508 390 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 STILQ15468 1287 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NKAIN3Q8N8D7 197 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 DENND6BQ8NEG7 585 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZPBPQ9BS86 351 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 GBA3Q9H227 469 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 AGAP1Q9UPQ3 857 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 RNGTTO60942 597 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TOM1L1O75674 476 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CNOT4O95628 575 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CHRNB1P11230 501 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 POLR2CP19387 275 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 MTIF2P46199 727 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CARD18P57730 90 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 FCHO2Q0JRZ9 810 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 FLOT2Q14254 428 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PLS1Q14651 629 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 C6orf118Q5T5N4 469 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ANKRD13CQ8N6S4 541 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 WNT5BQ9H1J7 359 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 DPH5Q9H2P9 285 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PLEKHA4Q9H4M7 779 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ANKEF1Q9NU02 776 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SIRT5Q9NXA8 310 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 MAPRE3Q9UPY8 281 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 USP16Q9Y5T5 823 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZNF804BA4D1E1 1349 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SLC9B1P1A6NJY1 282 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 BTBD19C9JJ37 291 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 GNB5O14775 395 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZBTB48P10074 688 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HOXC12P31275 282 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PTK2Q05397 1052 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 STK4Q13043 487 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EZH2Q15910 746 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 METTL2BQ6P1Q9 378 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SLC30A10Q6XR72 485 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CDR2LQ86X02 465 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SLC22A9Q8IVM8 553 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 AFAP1L2Q8N4X5 818 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ASZ1Q8WWH4 475 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 RFKQ969G6 155 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 L3MBTL2Q969R5 705 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 OMA1Q96E52 524 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CARD6Q9BX69 1037 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 XKR8Q9H6D3 395 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZSWIM6Q9HCJ5 1215 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZBTB21Q9ULJ3 1066 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 FARP1Q9Y4F1 1045 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TTC21BQ7Z4L5 1316 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 H0YCG3 227 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 H3BM21 787 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 MEN1O00255 615 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 ENPP3O14638 875 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 LSP1P33241 339 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 MYLK3Q32MK0 819 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 KANK2Q63ZY3 851 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 ARMC6Q6NXE6 501 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 FAM83AQ86UY5 434 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC28AQ8IWP9 274 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 SYCE1Q8N0S2 351 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 PPP1R13BQ96KQ4 1090 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 VTA1Q9NP79 307 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 PRDM5Q9NQX1 630 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-209ENST00000639244 ARMC1Q9NVT9 282 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 DNAJB5O75953 348 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 STARP49675 285 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 ZMYND11Q15326 602 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 METTL21CQ5VZV1 264 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 LARP1Q6PKG0 1096 aaKnown RBP4.55□□□□□ -1.68
SCN3A-209ENST00000639244 NAXEQ8NCW5 288 aa4.55□□□□□ -1.68
SCN3A-209ENST00000639244 SLC26A7Q8TE54 656 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms