RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 ASB7Q9H672 318 aa12.68□□□□□ -0.38
TARDBP-229ENST00000638264 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-229ENST00000638264 PRKAG2Q9UGJ0 569 aa12.68□□□□□ -0.38
TARDBP-229ENST00000638264 CPSF3Q9UKF6 684 aaKnown RBP12.68□□□□□ -0.38
TARDBP-229ENST00000638264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
TARDBP-229ENST00000638264 PMM2O15305 246 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 P4HA2O15460 535 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 EFCAB14O75071 495 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 ADRB2P07550 413 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 RAG1P15918 1043 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 CASP4P49662 377 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 VAMP7P51809 220 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
TARDBP-229ENST00000638264 CLDN10P78369 228 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 CYP24A1Q07973 514 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 KRT31Q15323 416 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-229ENST00000638264 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
TARDBP-229ENST00000638264 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 FNBP1Q96RU3 617 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 HAPLN2Q9GZV7 340 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
TARDBP-229ENST00000638264 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 RGS18Q9NS28 235 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 FAM105AQ9NUU6 356 aa12.67□□□□□ -0.38
TARDBP-229ENST00000638264 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-229ENST00000638264 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 A0A1B0GTH6 734 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
TARDBP-229ENST00000638264 NBNO60934 754 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 NPTXRO95502 500 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 EOMESO95936 686 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
TARDBP-229ENST00000638264 UBASH3AP57075 661 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 CETN1Q12798 172 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 FKBP15Q5T1M5 1219 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 SLC24A5Q71RS6 500 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 SAAL1Q96ER3 474 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-229ENST00000638264 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
TARDBP-229ENST00000638264 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 DERAQ9Y315 318 aa12.66□□□□□ -0.38
TARDBP-229ENST00000638264 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 SLC34A2O95436 690 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 CYP2C18P33260 490 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 ACOT2P49753 483 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 FAM189BP81408 668 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 APTXQ7Z2E3 356 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 WDR49Q8IV35 697 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 SLC35C1Q96A29 364 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 IQCDQ96DY2 449 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 EEF2KMTQ96G04 330 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 ADAM2Q99965 735 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 TMX1Q9H3N1 280 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 NDST4Q9H3R1 872 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
TARDBP-229ENST00000638264 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 IPPQ9Y573 584 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
TARDBP-229ENST00000638264 ABHD14A-ACY1A0A1B0GW23 586 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 TTC26A0AVF1 554 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 XPOTO43592 962 aaKnown RBP12.64□□□□□ -0.39
TARDBP-229ENST00000638264 ITGA4P13612 1032 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 CCL23P55773 120 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 KCNH2Q12809 1159 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.396e-7■□□□□ 8.8
TARDBP-229ENST00000638264 IKBKEQ14164 716 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 GPNMBQ14956 572 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 NR1I3Q14994 352 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
TARDBP-229ENST00000638264 HSP90AA4PQ58FG1 418 aa12.64□□□□□ -0.39
TARDBP-229ENST00000638264 XKR4Q5GH76 650 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms