RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 IQUBQ8NA54 791 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
CLN6-225ENST00000638144 TMEM169Q96HH4 297 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 LMAN2LQ9H0V9 348 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 KCNH3Q9ULD8 1083 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
CLN6-225ENST00000638144 PDCD11Q14690 1871 aaKnown RBP13.72□□□□□ -0.21
CLN6-225ENST00000638144 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 PER2O15055 1255 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 INPPL1O15357 1258 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 LINC01565O15544 149 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 MEFVO15553 781 aaPredicted RBP13.71□□□□□ -0.21
CLN6-225ENST00000638144 MYBP10242 640 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 LIG4P49917 911 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 ASIC1P78348 528 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.21
CLN6-225ENST00000638144 DSC1Q08554 894 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 KCNA1Q09470 495 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 HYAL1Q12794 435 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 COASYQ13057 564 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 HERC4Q5GLZ8 1057 aaPredicted RBP13.71□□□□□ -0.21
CLN6-225ENST00000638144 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 SLC39A4Q6P5W5 647 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 HASPINQ8TF76 798 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
CLN6-225ENST00000638144 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
CLN6-225ENST00000638144 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 ANKRD63C9JTQ0 380 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 H0YCG3 227 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
CLN6-225ENST00000638144 NRP1O14786 923 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 FSCN2O14926 492 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 TOM1L1O75674 476 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 GCNT3O95395 438 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 MCF2P10911 925 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 GAP43P17677 238 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 TNFSF9P41273 254 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 GRM5P41594 1212 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 NRIP1P48552 1158 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 KCNQ1P51787 676 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 NUCB2P80303 420 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 KRT17Q04695 432 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 GRIK3Q13003 919 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 CLUL1Q15846 466 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 TMC7Q7Z402 723 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 VPS52Q8N1B4 723 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
CLN6-225ENST00000638144 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
CLN6-225ENST00000638144 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 UBE2ZQ9H832 354 aaPredicted RBP13.7□□□□□ -0.22
CLN6-225ENST00000638144 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 CLDND1Q9NY35 253 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
CLN6-225ENST00000638144 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 BDP1A6H8Y1 2624 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 FRMD3A2A2Y4 597 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 CLDN3O15551 220 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
CLN6-225ENST00000638144 PPP1R37O75864 691 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 CXCL8P10145 99 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 KCNA5P22460 613 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 CMA1P23946 247 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 IGFBP6P24592 240 aaPredicted RBP13.69□□□□□ -0.22
CLN6-225ENST00000638144 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
CLN6-225ENST00000638144 NDUFA8P51970 172 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 GTF2BQ00403 316 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 UBE3AQ05086 875 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 SPAG1Q07617 926 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 CUL4BQ13620 913 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 ZNF720Q7Z2F6 126 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
CLN6-225ENST00000638144 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 HLA-CQ95604 372 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 B3GALT6Q96L58 329 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 SNX27Q96L92 541 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
CLN6-225ENST00000638144 KCNG1Q9UIX4 513 aa13.69□□□□□ -0.22
CLN6-225ENST00000638144 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms