RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	GSX1	Q9H4S2	264 aa	Predicted RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	EPS8L2	Q9H6S3	715 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	RC3H2	Q9HBD1	1191 aa	Known RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	ZBTB26	Q9HCK0	441 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	KCNK9	Q9NPC2	374 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	HEYL	Q9NQ87	328 aa	Predicted RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	PNPO	Q9NVS9	261 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	GFOD1	Q9NXC2	390 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	TAS2R10	Q9NYW0	307 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	GPRC5B	Q9NZH0	403 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	EHD2	Q9NZN4	543 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	KCMF1	Q9P0J7	381 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	MARCH4	Q9P2E8	410 aa	Predicted RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	MYO1A	Q9UBC5	1043 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	ZNF212	Q9UDV6	495 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	CNOT7	Q9UIV1	285 aa	Known RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	TCFL5	Q9UL49	500 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	DENND2A	Q9ULE3	1009 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	C19orf53	Q9UNZ5	99 aa	Predicted RBP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	SRPK3	Q9UPE1	567 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	WASF3	Q9UPY6	502 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	VWA7	Q9Y334	891 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	NEU2	Q9Y3R4	380 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	PCDHB6	Q9Y5E3	794 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	PCDHA2	Q9Y5H9	948 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	PCDHA11	Q9Y5I1	949 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	SNX11	Q9Y5W9	270 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533		X6R8D5	127 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	RPTOR	Q8N122	1335 aa		1.81	□□□□□ -2.12
MECP2-222	ENST00000637533	TMEM265	A0A087WTH1	108 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	GOLGA6L10	A0A0M3HER8	536 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533		A0A1W2PPC4	97 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	SLC35F4	A4IF30	521 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PI4KAP2	A4QPH2	592 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TMEM247	A6NEH6	219 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533		A6NLC8	198 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	FIGNL2	A6NMB9	653 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ZNF891	A8MT65	544 aa	Predicted RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	C9orf172	C9J069	976 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533		H3BM21	787 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533		H7C0S8	307 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	STXBP3	O00186	592 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PODXL	O00592	558 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	C2CD2L	O14523	706 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	AP3D1	O14617	1153 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	H2AFY	O75367	372 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	MTA2	O94776	668 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RHOBTB3	O94955	611 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PRAMEF1	O95521	474 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PNP	P00491	289 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TK1	P04183	234 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	HLA-DOA	P06340	250 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	CKM	P06732	381 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PFKM	P08237	780 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ITGA5	P08648	1049 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	GSTM1	P09488	218 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RHOXF2B	P0C7M4	288 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	FAM200B	P0CF97	657 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	IRF1	P10914	325 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	NCAM1	P13591	858 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	P4HA1	P13674	534 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PLS3	P13797	630 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RAC2	P15153	192 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	CD19	P15391	556 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	VAV1	P15498	845 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ELN	P15502	786 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RPS2	P15880	293 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PDE6A	P16499	860 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TMEM11	P17152	192 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	KRT15	P19012	456 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	EEF1B2	P24534	225 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	CST5	P28325	142 aa	Predicted RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RXRB	P28702	533 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	POLR2B	P30876	1174 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	SLC5A2	P31639	672 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	IL13	P35225	146 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	SERPINF1	P36955	418 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	NNMT	P40261	264 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	MATR3	P43243	847 aa	Known RBP eCLIP	1.8	□□□□□ -2.12	1e-6	■■■■□ 24.8
MECP2-222	ENST00000637533	PSMC4	P43686	418 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PCP4	P48539	62 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	HSPA7	P48741	367 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PRIM2	P49643	509 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	CLK1	P49759	484 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	FXR1	P51114	621 aa	Known RBP eCLIP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	HK3	P52790	923 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TERF1	P54274	439 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	EPHA5	P54756	1037 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	MANF	P55145	182 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	NLRP12	P59046	1061 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	RAB1A	P62820	205 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	MRPS35	P82673	323 aa	Known RBP	1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ROR1	Q01973	937 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	PTS	Q03393	145 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ZBTB16	Q05516	673 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	ZNF543	Q08ER8	600 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TFCP2	Q12800	502 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	MPP3	Q13368	585 aa		1.8	□□□□□ -2.12
MECP2-222	ENST00000637533	TMED1	Q13445	227 aa		1.8	□□□□□ -2.12

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