RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 NAMPTP43490 491 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 SKOR1P84550 965 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 EMC2Q15006 297 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 SLC39A4Q6P5W5 647 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 RUFY4Q6ZNE9 571 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 SV2AQ7L0J3 742 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ANKRD35Q8N283 1001 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 SEMA4DQ92854 862 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
CLN8-212ENST00000637083 XPNPEP1Q9NQW7 623 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 GPRC5DQ9NZD1 345 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 MAFBQ9Y5Q3 323 aaPredicted RBP13.03□□□□□ -0.32
CLN8-212ENST00000637083 MYBL1P10243 752 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 DLATP10515 647 aaKnown RBP13.03□□□□□ -0.32
CLN8-212ENST00000637083 RFC5P40937 340 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 DR1Q01658 176 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 FMO1Q01740 532 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 PSMD6Q15008 389 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ACAD10Q6JQN1 1059 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ARFGAP2Q8N6H7 521 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 SLC7A3Q8WY07 619 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 ZSWIM1Q9BR11 485 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 FAM213AQ9BRX8 229 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 RLFQ13129 1914 aa13.02□□□□□ -0.32
CLN8-212ENST00000637083 PODXLO00592 558 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 PIGRP01833 764 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 ITGA4P13612 1032 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 CTNNA2P26232 953 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 CLDN10P78369 228 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 POU5F1Q01860 360 aaKnown RBP13.02□□□□□ -0.33
CLN8-212ENST00000637083 SP4Q02446 784 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 MESDQ14696 234 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 GPC2Q8N158 579 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 DEPTORQ8TB45 409 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 ZNF564Q8TBZ8 553 aaPredicted RBP13.02□□□□□ -0.33
CLN8-212ENST00000637083 KAT5Q92993 513 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 ZNF653Q96CK0 615 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 PORCNQ9H237 461 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 PLEKHA4Q9H4M7 779 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 PARP2Q9UGN5 583 aa13.02□□□□□ -0.33
CLN8-212ENST00000637083 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
CLN8-212ENST00000637083 K7ERI5 159 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 TTI1O43156 1089 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 SPOPO43791 374 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 PHF2O75151 1096 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 MMEP08473 750 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 KRT5P13647 590 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 DRG2P55039 364 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 NEDD9Q14511 834 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 C15orf39Q6ZRI6 1047 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLN8-212ENST00000637083 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 NUP85Q9BW27 656 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 NIFKQ9BYG3 293 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 AGO2Q9UKV8 859 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 PLAAQ9Y263 795 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 ARID2Q68CP9 1835 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 DAPK3O43293 454 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 MYZAPP0CAP1 466 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 TNNI1P19237 187 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 COMTP21964 271 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 ECHS1P30084 290 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 TTMPQ5BVD1 217 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 CYFIP1Q7L576 1253 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 ARL8AQ96BM9 186 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 ERP44Q9BS26 406 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
CLN8-212ENST00000637083 TMEM134Q9H6X4 195 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 PCDHB2Q9Y5E7 798 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
CLN8-212ENST00000637083 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
CLN8-212ENST00000637083 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 TGFB3P10600 412 aa13□□□□□ -0.33
CLN8-212ENST00000637083 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
CLN8-212ENST00000637083 HSD17B3P37058 310 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms