RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 MYO15AQ9UKN7 3530 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.24■□□□□ 0.83
CLN6-214ENST00000636314 TTLL13PA6NNM8 815 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 ALDH2P05091 517 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 SYT1P21579 422 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 NUBP1P53384 320 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 PEX3P56589 373 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
CLN6-214ENST00000636314 C12orf76Q8N812 135 aaPredicted RBP20.24■□□□□ 0.83
CLN6-214ENST00000636314 RPS6KC1Q96S38 1066 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 TIPINQ9BVW5 301 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 SMOC2Q9H3U7 446 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 STK39Q9UEW8 545 aa20.24■□□□□ 0.83
CLN6-214ENST00000636314 PRG3Q9Y2Y8 225 aaPredicted RBP20.24■□□□□ 0.83
CLN6-214ENST00000636314 NRP1O14786 923 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 EDN1P05305 212 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 ASGR2P07307 311 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 CTSAP10619 480 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 UBA7P41226 1012 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 OR1G1P47890 313 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 NPTX2P47972 431 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 TMEM119Q4V9L6 283 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 C1orf186Q6ZWK4 172 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 COLGALT2Q8IYK4 626 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 DAW1Q8N136 415 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 TDRD5Q8NAT2 981 aaKnown RBP20.23■□□□□ 0.83
CLN6-214ENST00000636314 AUTS2Q8WXX7 1259 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 KLK14Q9P0G3 267 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 USP20Q9Y2K6 914 aa20.23■□□□□ 0.83
CLN6-214ENST00000636314 K7ERI5 159 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 SLC26A4O43511 780 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 NR1I2O75469 434 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 DSC1Q08554 894 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 GRIK3Q13003 919 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 MAPK7Q13164 816 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 GIT2Q14161 759 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 DCAF4L1Q3SXM0 396 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 TMEM105Q8N8V8 129 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
CLN6-214ENST00000636314 RASSF8Q8NHQ8 419 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 CALML4Q96GE6 196 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 MFSD1Q9H3U5 465 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 KMT5AQ9NQR1 393 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 DZANK1Q9NVP4 752 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
CLN6-214ENST00000636314 C2orf16Q68DN1 1984 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 EPCAMP16422 314 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 LONP1P36776 959 aaKnown RBP20.21■□□□□ 0.83
CLN6-214ENST00000636314 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 RESTQ13127 1097 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 ATAT1Q5SQI0 421 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 ATF7IP2Q5U623 682 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 EEF1DP3Q658K8 133 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 KIAA1841Q6NSI8 718 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 APBB1IPQ7Z5R6 666 aaPredicted RBP20.21■□□□□ 0.83
CLN6-214ENST00000636314 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 SNTG2Q9NY99 539 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 LIMD1Q9UGP4 676 aa20.21■□□□□ 0.83
CLN6-214ENST00000636314 RECQL4O94761 1208 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 GRIN1Q05586 938 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 NT5DC1Q5TFE4 455 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 ZDHHC14Q8IZN3 488 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 GSTCDQ8NEC7 633 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 MARCH5Q9NX47 278 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 ARHGAP28Q9P2N2 729 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 DAXXQ9UER7 740 aaPredicted RBP20.2■□□□□ 0.82
CLN6-214ENST00000636314 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
CLN6-214ENST00000636314 IRAK3Q9Y616 596 aa20.2■□□□□ 0.82
CLN6-214ENST00000636314 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 SPDYE4A6NLX3 237 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 PROB1E7EW31 1015 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 PTPN14Q15678 1187 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 ASTLQ6HA08 431 aaPredicted RBP20.19■□□□□ 0.82
CLN6-214ENST00000636314 ASCL5Q7RTU5 278 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 PLCD3Q8N3E9 789 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 SNX21Q969T3 373 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 HERC2P3Q9BVR0 1158 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
CLN6-214ENST00000636314 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 TNFSF13BQ9Y275 285 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
CLN6-214ENST00000636314 VPS13AQ96RL7 3174 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 SLC16A4O15374 487 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 SOD2P04179 222 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 URODP06132 367 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 PLS3P13797 630 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 KARSQ15046 597 aaKnown RBP20.18■□□□□ 0.82
CLN6-214ENST00000636314 ZNF568Q3ZCX4 644 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms