RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 TEX28O15482 410 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 GAS2O43903 313 aaKnown RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 ZNF862O60290 1169 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 DKC1O60832 514 aaKnown RBP eCLIP8.21□□□□□ -1.1
CIITA-214ENST00000636238 MAFO75444 373 aaPredicted RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 KRT37O76014 449 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 MBD3O95983 291 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 DCNP07585 359 aaKnown RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 ADRB1P08588 477 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 LIG1P18858 919 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 ME1P48163 572 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 NASPP49321 788 aaPredicted RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 USP11P51784 963 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 NRLP54845 237 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PPP2R5DQ14738 602 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 SLC39A14Q15043 492 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PTPAQ15257 358 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 ST3GAL2Q16842 350 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PDXDC1Q6P996 788 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 CATSPER4Q7RTX7 472 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 SRGAP1Q7Z6B7 1085 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 MAML2Q8IZL2 1156 aaPredicted RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 FAM177A1Q8N128 213 aaPredicted RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 DAGLBQ8NCG7 672 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 NETO1Q8TDF5 533 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 RIN2Q8WYP3 895 aaPredicted RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 CLDN23Q96B33 292 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 MBOAT7Q96N66 472 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 MYADMQ96S97 322 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 NT5C3AQ9H0P0 336 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PIDD1Q9HB75 910 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 CHST7Q9NS84 486 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 GMEB2Q9UKD1 530 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 CDH7Q9ULB5 785 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PCDHA7Q9UN72 937 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 SMG5Q9UPR3 1016 aaKnown RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 MRPS17Q9Y2R5 130 aaKnown RBP8.21□□□□□ -1.1
CIITA-214ENST00000636238 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 PCDHB2Q9Y5E7 798 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 FRYLO94915 3013 aa8.21□□□□□ -1.1
CIITA-214ENST00000636238 DENND4AQ7Z401 1863 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 CCDC194A0A1B0GVG4 234 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 NRP1O14786 923 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 ASAP2O43150 1006 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 ZMYND10O75800 440 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 YEATS4O95619 227 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 AXLP30530 894 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 DSC1Q08554 894 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 MLF2Q15773 248 aaPredicted RBP8.2□□□□□ -1.1
CIITA-214ENST00000636238 INF2Q27J81 1249 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 USP41Q3LFD5 358 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 SPECC1Q5M775 1068 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 TTC38Q5R3I4 469 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 ZBTB41Q5SVQ8 909 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 GALNT17Q6IS24 598 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 LILRA6Q6PI73 481 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 AGMOQ6ZNB7 445 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 ZNF280BQ86YH2 543 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 HACE1Q8IYU2 909 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 RSAD2Q8WXG1 361 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 LENG9Q96B70 501 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 CLIC6Q96NY7 704 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 CEP89Q96ST8 783 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 COLEC11Q9BWP8 271 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 TEKT3Q9BXF9 490 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
CIITA-214ENST00000636238 SPATA6Q9NWH7 488 aaPredicted RBP8.2□□□□□ -1.1
CIITA-214ENST00000636238 TMEM63CQ9P1W3 806 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 SUCLA2Q9P2R7 463 aaPredicted RBP8.2□□□□□ -1.1
CIITA-214ENST00000636238 DNAJB4Q9UDY4 337 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 KCNH3Q9ULD8 1083 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 NOL7Q9UMY1 257 aaKnown RBP8.2□□□□□ -1.1
CIITA-214ENST00000636238 INPP5FQ9Y2H2 1132 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
CIITA-214ENST00000636238 ATRXP46100 2492 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 A0A087WZ62 844 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 SLC30A4O14863 429 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 GAS7O60861 476 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 XYLBO75191 536 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 DDHD2O94830 711 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 GLULP15104 373 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 FSHRP23945 695 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 MCM7P33993 719 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 RFC5P40937 340 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 GRIN1Q05586 938 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 POU5F1BQ06416 359 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 NCBP1Q09161 790 aaKnown RBP8.19□□□□□ -1.1
CIITA-214ENST00000636238 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 PRR16Q569H4 304 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 LAIR1Q6GTX8 287 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 MOXD1Q6UVY6 613 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 COLGALT2Q8IYK4 626 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 DCLK2Q8N568 766 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 CELF5Q8N6W0 485 aaKnown RBP8.19□□□□□ -1.1
CIITA-214ENST00000636238 FSIP1Q8NA03 581 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms