RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MAPKAPK5Q8IW41 473 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 UNC5BQ8IZJ1 945 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 GSTCDQ8NEC7 633 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 SPATA3Q8NHX4 192 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 RTF1Q92541 710 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 UBXN4Q92575 508 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 MRFAP1L1Q96HT8 127 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 CDC5LQ99459 802 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 DNAJC7Q99615 494 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 WACQ9BTA9 647 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 OSBPL2Q9H1P3 480 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 TBCCD1Q9NVR7 557 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 ARPP21Q9UBL0 812 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 USP18Q9UMW8 372 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 ATP11BQ9Y2G3 1177 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF521Q96K83 1311 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 PTPDC1A2A3K4 754 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 WIPF3A6NGB9 483 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TBKBP1A7MCY6 615 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PRAMEF4O60810 478 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PROP1O75360 226 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 GLRX3O76003 335 aaKnown RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 CYP17A1P05093 508 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 KCNA6P17658 529 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 SLC9A1P19634 815 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 GPD1P21695 349 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TKTP29401 623 aaKnown RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 CCKBRP32239 447 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PTGER1P34995 402 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 CCT4P50991 539 aaKnown RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 MGAT5Q09328 741 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 KLF9Q13886 244 aaPredicted RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF174Q15697 407 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 NFE2L2Q16236 605 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ARHGAP44Q17R89 818 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TSTD2Q5T7W7 516 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TSHZ3Q63HK5 1081 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF626Q68DY1 528 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ARMC6Q6NXE6 501 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 LMBR1LQ6UX01 489 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PTF1AQ7RTS3 328 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 KANSL1Q7Z3B3 1105 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TECPR1Q7Z6L1 1165 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 NME9Q86XW9 330 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PHYKPLQ8IUZ5 450 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 MDM1Q8TC05 714 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 RGMAQ96B86 450 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF669Q96BR6 464 aaPredicted RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PTCD3Q96EY7 689 aaKnown RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PDLIM2Q96JY6 352 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF48Q96MX3 618 aaPredicted RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 UROC1Q96N76 676 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 DEPDC7Q96QD5 511 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ELF4Q99607 663 aaPredicted RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ADGRE3Q9BY15 652 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 CCDC113Q9H0I3 377 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 TOMM22Q9NS69 142 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 SNTG2Q9NY99 539 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 SAMD15Q9P1V8 674 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ZNF580Q9UK33 172 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 CDK11AQ9UQ88 783 aaPredicted RBP1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 PCDHB6Q9Y5E3 794 aa1.61□□□□□ -2.15
SMARCB1-209ENST00000635578 ST20-MTHFSA0A0A6YYL1 179 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 FAM221BA6H8Z2 402 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 H3BNC9 293 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ITGA10O75578 1167 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 NPTXRO95502 500 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ELANEP08246 267 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 PRR35P0CG20 571 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 CANXP27824 592 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ITPKBP27987 946 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 MECP2P51608 486 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 RAP2BP61225 183 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 CXADRP78310 365 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 HSD11B2P80365 405 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 RBL2Q08999 1139 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 EIF2B5Q13144 721 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 RASGRF1Q13972 1273 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 UBE3CQ15386 1083 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 BMT2Q1RMZ1 405 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 CCDC144BQ3MJ40 725 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 TMEM119Q4V9L6 283 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 AGAP9Q5VTM2 703 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 METRNLQ641Q3 311 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 B3GNTL1Q67FW5 361 aaPredicted RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 MED25Q71SY5 747 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 TAS1R1Q7RTX1 841 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 DDX53Q86TM3 631 aaKnown RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 TMEM132CQ8N3T6 1108 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 VGLL2Q8N8G2 317 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 CHST14Q8NCH0 376 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ZFP28Q8NHY6 868 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ADAMTS15Q8TE58 950 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 HASPINQ8TF76 798 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 ARMC5Q96C12 935 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 CEP95Q96GE4 821 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 FDXACB1Q9BRP7 624 aaPredicted RBP1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 GALNT9Q9HCQ5 603 aa1.6□□□□□ -2.15
SMARCB1-209ENST00000635578 KLHL11Q9NVR0 708 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms